Literature DB >> 11454757

Tc8, a Tourist-like transposon in Caenorhabditis elegans.

Q H Le1, K Turcotte, T Bureau.   

Abstract

Members of the Tourist family of miniature inverted-repeat transposable elements (MITEs) are very abundant among a wide variety of plants, are frequently found associated with normal plant genes, and thus are thought to be important players in the organization and evolution of plant genomes. In Arabidopsis, the recent discovery of a Tourist member harboring a putative transposase has shed new light on the mobility and evolution of MITEs. Here, we analyze a family of Tourist transposons endogenous to the genome of the nematode Caenorhabditis elegans (Bristol N2). One member of this large family is 7568 bp in length, harbors an ORF similar to the putative Tourist transposase from Arabidopsis, and is related to the IS5 family of bacterial insertion sequences (IS). Using database searches, we found expressed sequence tags (ESTs) similar to the putative Tourist transposases in plants, insects, and vertebrates. Taken together, our data suggest that Tourist-like and IS5-like transposons form a superfamily of potentially active elements ubiquitous to prokaryotic and eukaryotic genomes.

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Year:  2001        PMID: 11454757      PMCID: PMC1461737     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  45 in total

1.  Characterization of repetitive DNA elements in Arabidopsis.

Authors:  S A Surzycki; W R Belknap
Journal:  J Mol Evol       Date:  1999-06       Impact factor: 2.395

Review 2.  Insertion sequences.

Authors:  J Mahillon; M Chandler
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

3.  Strain evolution in Caenorhabditis elegans: transposable elements as markers of interstrain evolutionary history.

Authors:  N K Egilmez; R H Ebert; R J Shmookler Reis
Journal:  J Mol Evol       Date:  1995-04       Impact factor: 2.395

4.  The IS4 family of insertion sequences: evidence for a conserved transposase motif.

Authors:  R Rezsöhazy; B Hallet; J Delcour; J Mahillon
Journal:  Mol Microbiol       Date:  1993-09       Impact factor: 3.501

5.  The mechanism of transposition of Tc3 in C. elegans.

Authors:  H G van Luenen; S D Colloms; R H Plasterk
Journal:  Cell       Date:  1994-10-21       Impact factor: 41.582

6.  Genomic analysis of Caenorhabditis elegans reveals ancient families of retroviral-like elements.

Authors:  N J Bowen; J F McDonald
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

7.  The Tc5 family of transposable elements in Caenorhabditis elegans.

Authors:  J J Collins; P Anderson
Journal:  Genetics       Date:  1994-07       Impact factor: 4.562

8.  Guest: a 98 bp inverted repeat transposable element in Neurospora crassa.

Authors:  P J Yeadon; D E Catcheside
Journal:  Mol Gen Genet       Date:  1995-04-10

9.  Meiotic recombination, noncoding DNA and genomic organization in Caenorhabditis elegans.

Authors:  T M Barnes; Y Kohara; A Coulson; S Hekimi
Journal:  Genetics       Date:  1995-09       Impact factor: 4.562

10.  Active gypsy/Ty3 retrotransposons or retroviruses in Caenorhabditis elegans.

Authors:  R J Britten
Journal:  Proc Natl Acad Sci U S A       Date:  1995-01-17       Impact factor: 11.205

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  7 in total

1.  PIFs meet Tourists and Harbingers: a superfamily reunion.

Authors:  J Jurka; V V Kapitonov
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-23       Impact factor: 11.205

2.  MAK, a computational tool kit for automated MITE analysis.

Authors:  Guojun Yang; Timothy C Hall
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

3.  PIF- and Pong-like transposable elements: distribution, evolution and relationship with Tourist-like miniature inverted-repeat transposable elements.

Authors:  Xiaoyu Zhang; Ning Jiang; Cédric Feschotte; Susan R Wessler
Journal:  Genetics       Date:  2004-02       Impact factor: 4.562

4.  hATpin, a family of MITE-like hAT mobile elements conserved in diverse plant species that forms highly stable secondary structures.

Authors:  Santiago Moreno-Vázquez; Jianchang Ning; Blake C Meyers
Journal:  Plant Mol Biol       Date:  2005-08       Impact factor: 4.076

5.  A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter.

Authors:  Guojun Yang; Yeon-Hee Lee; Yiming Jiang; Xiangyu Shi; Sunee Kertbundit; Timothy C Hall
Journal:  Plant Cell       Date:  2005-04-01       Impact factor: 11.277

6.  P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases.

Authors:  X Zhang; C Feschotte; Q Zhang; N Jiang; W B Eggleston; S R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-02       Impact factor: 11.205

7.  Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome.

Authors:  Sylvia E J Fischer; Erno Wienholds; Ronald H A Plasterk
Journal:  Genetics       Date:  2003-05       Impact factor: 4.562

  7 in total

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