Literature DB >> 8106333

Insertion sequence IS6100 on plasmid pOAD2, which degrades nylon oligomers.

K Kato1, K Ohtsuki, H Mitsuda, T Yomo, S Negoro, I Urabe.   

Abstract

The nucleotide sequence of repeated sequence I, which appears in five regions on nylon oligomer-degrading plasmid pOAD2, harbored in Flavobacterium sp. strain K172, was determined. The five regions of repeated sequence I had 880 bp of identical sequence, and the sequence was identical to that of IS6100, an insertion sequence classified in the IS6 family, initially found in Mycobacterium fortuitum. Sequences homologous to that of IS6100 were found for another nylon oligomer-degrading plasmid, pNAD2, harbored in Pseudomonas sp. strain NK87, by Southern hybridization experiments.

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Year:  1994        PMID: 8106333      PMCID: PMC205175          DOI: 10.1128/jb.176.4.1197-1200.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  13 in total

1.  Segregation of Lambda Lysogenicity during Bacterial Recombination in Escherichia Coli K12.

Authors:  R K Appleyard
Journal:  Genetics       Date:  1954-07       Impact factor: 4.562

2.  Transposition of an antibiotic resistance element in mycobacteria.

Authors:  C Martin; J Timm; J Rauzier; R Gomez-Lus; J Davies; B Gicquel
Journal:  Nature       Date:  1990-06-21       Impact factor: 49.962

3.  6-Aminohexanoic acid cyclic dimer hydrolase. A new cyclic amide hydrolase produced by Achromobacter guttatus KI74.

Authors:  S Kinoshita; S Negoro; M Muramatsu; V S Bisaria; S Sawada; H Okada
Journal:  Eur J Biochem       Date:  1977-11-01

4.  Evolutionary adaptation of plasmid-encoded enzymes for degrading nylon oligomers.

Authors:  H Okada; S Negoro; H Kimura; S Nakamura
Journal:  Nature       Date:  1983 Nov 10-16       Impact factor: 49.962

5.  Plasmid control of 6-aminohexanoic acid cyclic dimer degradation enzymes of Flavobacterium sp. KI72.

Authors:  S Negoro; H Shinagawa; A Nakata; S Kinoshita; T Hatozaki; H Okada
Journal:  J Bacteriol       Date:  1980-07       Impact factor: 3.490

6.  Plasmid dependence of Pseudomonas sp. strain NK87 enzymes that degrade 6-aminohexanoate-cyclic dimer.

Authors:  K Kanagawa; S Negoro; N Takada; H Okada
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

7.  High homology between 6-aminohexanoate-cyclic-dimer hydrolases of Flavobacterium and Pseudomonas strains.

Authors:  K Tsuchiya; S Fukuyama; N Kanzaki; K Kanagawa; S Negoro; H Okada
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

8.  Purification and characterization of 6-aminohexanoic-acid-oligomer hydrolase of Flavobacterium sp. Ki72.

Authors:  S Kinoshita; T Terada; T Taniguchi; Y Takene; S Masuda; N Matsunaga; H Okada
Journal:  Eur J Biochem       Date:  1981-06-01

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Plasmid-determined enzymatic degradation of nylon oligomers.

Authors:  S Negoro; T Taniguchi; M Kanaoka; H Kimura; H Okada
Journal:  J Bacteriol       Date:  1983-07       Impact factor: 3.490

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  11 in total

Review 1.  Insertion sequences.

Authors:  J Mahillon; M Chandler
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

2.  Isolation by genetic labeling of a new mycobacterial plasmid, pJAZ38, from Mycobacterium fortuitum.

Authors:  J A Gavigan; J A Aínsa; E Pérez; I Otal; C Martín
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

Review 3.  The nylon oligomer biodegradation system of Flavobacterium and Pseudomonas.

Authors:  S Negoro; K Kato; K Fujiyama; H Okada
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

Review 4.  Catabolic transposons.

Authors:  R C Wyndham; A E Cashore; C H Nakatsu; M C Peel
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

5.  Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation.

Authors:  Ryo Miyazaki; Yukari Sato; Michihiro Ito; Yoshiyuki Ohtsubo; Yuji Nagata; Masataka Tsuda
Journal:  Appl Environ Microbiol       Date:  2006-09-08       Impact factor: 4.792

6.  The genes coding for the conversion of carbazole to catechol are flanked by IS6100 elements in Sphingomonas sp. strain XLDN2-5.

Authors:  Zhonghui Gai; Xiaoyu Wang; Xiaorui Liu; Cui Tai; Hongzhi Tang; Xiaofei He; Geng Wu; Zixin Deng; Ping Xu
Journal:  PLoS One       Date:  2010-04-02       Impact factor: 3.240

7.  Microbial co-habitation and lateral gene transfer: what transposases can tell us.

Authors:  Sean D Hooper; Konstantinos Mavromatis; Nikos C Kyrpides
Journal:  Genome Biol       Date:  2009-04-24       Impact factor: 13.583

8.  Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer.

Authors:  Charu Dogra; Vishakha Raina; Rinku Pal; Mrutyunjay Suar; Sukanya Lal; Karl-Heinz Gartemann; Christof Holliger; Jan Roelof van der Meer; Rup Lal
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

9.  Expression of the strA-strB streptomycin resistance genes in Pseudomonas syringae and Xanthomonas campestris and characterization of IS6100 in X. campestris.

Authors:  G W Sundin; C L Bender
Journal:  Appl Environ Microbiol       Date:  1995-08       Impact factor: 4.792

10.  Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway.

Authors:  Sascha Mormann; Alexander Lömker; Christian Rückert; Lars Gaigalat; Andreas Tauch; Alfred Pühler; Jörn Kalinowski
Journal:  BMC Genomics       Date:  2006-08-10       Impact factor: 3.969

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