Literature DB >> 8078769

DNA binding and bending properties of the post-meiotically expressed Sry-related protein Sox-5.

F Connor1, P D Cary, C M Read, N S Preston, P C Driscoll, P Denny, C Crane-Robinson, A Ashworth.   

Abstract

Sox-5 is one of a family of genes which show homology to the HMG box region of the testis determining gene SRY. We have used indirect immunofluorescence to show that Sox-5 protein is localized to the nucleus of post-meiotic round spermatids in the mouse testis. In vitro footprinting and gel retardation assays demonstrate that Sox-5 binds specifically to the sequence AACAAT with moderately high affinity (Kd of approximately 10(-9) M). Moreover, interaction of Sox-5 with its target DNA induces a significant bend in the DNA, characteristic of HMG box proteins. Circular dichroism spectroscopy of the Sox-5 HMG box and its specific complex with DNA shows an alteration in the DNA spectrum, perhaps as a consequence of DNA bending, but none in the protein spectrum on complex formation. The dependence of the change in the CD spectrum with protein to DNA ratio demonstrates the formation of a 1:1 complex. Analysis of the structure of the Sox-5 HMG box by 2D NMR suggests that both the location of helical secondary structure as well as the tertiary structure is similar to that of HMG1 box 2.

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Year:  1994        PMID: 8078769      PMCID: PMC523727          DOI: 10.1093/nar/22.16.3339

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  36 in total

1.  The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures.

Authors:  K Giese; J Cox; R Grosschedl
Journal:  Cell       Date:  1992-04-03       Impact factor: 41.582

2.  DNA--protein interactions. HMG has DNA wrapped up.

Authors:  D M Lilley
Journal:  Nature       Date:  1992-05-28       Impact factor: 49.962

3.  DNA-binding properties of the product of the testis-determining gene and a related protein.

Authors:  N Nasrin; C Buggs; X F Kong; J Carnazza; M Goebl; M Alexander-Bridges
Journal:  Nature       Date:  1991-11-28       Impact factor: 49.962

Review 4.  Sex determination in mammals.

Authors:  A McLaren
Journal:  Trends Genet       Date:  1988-06       Impact factor: 11.639

5.  Solution structure of a DNA-binding domain from HMG1.

Authors:  C M Read; P D Cary; C Crane-Robinson; P C Driscoll; D G Norman
Journal:  Nucleic Acids Res       Date:  1993-07-25       Impact factor: 16.971

6.  Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.

Authors:  D B Smith; K S Johnson
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

7.  Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system.

Authors:  F W Studier
Journal:  J Mol Biol       Date:  1991-05-05       Impact factor: 5.469

8.  Nucleolar transcription factor hUBF contains a DNA-binding motif with homology to HMG proteins.

Authors:  H M Jantzen; A Admon; S P Bell; R Tjian
Journal:  Nature       Date:  1990-04-26       Impact factor: 49.962

9.  Distinct DNA-binding properties of the high mobility group domain of murine and human SRY sex-determining factors.

Authors:  K Giese; J Pagel; R Grosschedl
Journal:  Proc Natl Acad Sci U S A       Date:  1994-04-12       Impact factor: 11.205

10.  A gene mapping to the sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes.

Authors:  J Gubbay; J Collignon; P Koopman; B Capel; A Economou; A Münsterberg; N Vivian; P Goodfellow; R Lovell-Badge
Journal:  Nature       Date:  1990-07-19       Impact factor: 49.962

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  39 in total

1.  The glial transcription factor Sox10 binds to DNA both as monomer and dimer with different functional consequences.

Authors:  R I Peirano; M Wegner
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

2.  Transcriptional silencing of {gamma}-globin by BCL11A involves long-range interactions and cooperation with SOX6.

Authors:  Jian Xu; Vijay G Sankaran; Min Ni; Tobias F Menne; Rishi V Puram; Woojin Kim; Stuart H Orkin
Journal:  Genes Dev       Date:  2010-04-15       Impact factor: 11.361

3.  Mechanism of regulatory target selection by the SOX high-mobility-group domain proteins as revealed by comparison of SOX1/2/3 and SOX9.

Authors:  Y Kamachi; K S Cheah; H Kondoh
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

Review 4.  Sry-box (Sox) transcription factors in gastrointestinal physiology and disease.

Authors:  A D Gracz; S T Magness
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2011-02-03       Impact factor: 4.052

5.  Structure-function relationships in human testis-determining factor SRY: an aromatic buttress underlies the specific DNA-bending surface of a high mobility group (HMG) box.

Authors:  Joseph D Racca; Yen-Shan Chen; James D Maloy; Nalinda Wickramasinghe; Nelson B Phillips; Michael A Weiss
Journal:  J Biol Chem       Date:  2014-09-24       Impact factor: 5.157

6.  The gene structure and organization of mouse PG-Lb, a small chondroitin/dermatan sulphate proteoglycan.

Authors:  Y Iwata; T Shinomura; K Kurita; M Zako; K Kimata
Journal:  Biochem J       Date:  1998-05-01       Impact factor: 3.857

7.  Regulation of IkappaBbeta expression in testis.

Authors:  Lucy M Budde; Chun Wu; Christopher Tilman; Iris Douglas; Sankar Ghosh
Journal:  Mol Biol Cell       Date:  2002-12       Impact factor: 4.138

Review 8.  Roles of intrinsic disorder in protein-nucleic acid interactions.

Authors:  H Jane Dyson
Journal:  Mol Biosyst       Date:  2011-08-26

Review 9.  SOX genes: architects of development.

Authors:  H M Prior; M A Walter
Journal:  Mol Med       Date:  1996-07       Impact factor: 6.354

10.  Identification of a novel nucleolin related protein (NRP) gene expressed during rat spermatogenesis.

Authors:  Keerthi T Chathoth; Gayatri Ganesan; M R S Rao
Journal:  BMC Mol Biol       Date:  2009-07-01       Impact factor: 2.946

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