Literature DB >> 8075634

A method for constructing radiation hybrid maps of whole genomes.

M A Walter1, D J Spillett, P Thomas, J Weissenbach, P N Goodfellow.   

Abstract

In radiation hybrid mapping, chromosomes in human-rodent hybrid cells are fragmented by X-rays and fragments rescued by fusion of the donor cell to a recipient rodent cell. The co-retention frequencies of markers in 100-200 hybrids are used to map individual chromosomes, but mapping the whole genome in this way is impractical. We have reverted to the original protocols of Goss and Harris and have produced a panel of 44 hybrids using irradiated human fibroblasts as donors. This panel has been used to make a map of human chromosome 14 containing 40 ordered markers. The map integrates previously published maps and localizes nine new markers. We suggest that the construction of a high resolution map of the whole human genome is feasible with a single panel of 100-200 hybrids.

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Year:  1994        PMID: 8075634     DOI: 10.1038/ng0594-22

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  61 in total

1.  A comprehensive view of human chromosome 1.

Authors:  P S White; E P Sulman; C J Porter; T C Matise
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

2.  RHdb: the radiation hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  RHdb: the Radiation Hybrid database.

Authors:  P Rodriguez-Tomé; P Lijnzaad
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

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5.  Point and interval estimates of marker location in radiation hybrid mapping.

Authors:  H M Stringham; M Boehnke; K Lange
Journal:  Am J Hum Genet       Date:  1999-08       Impact factor: 11.025

6.  Interspersed repetitive sequence (IRS)-PCR for typing of whole genome radiation hybrid panels.

Authors:  H Himmelbauer; L C Schalkwyk; H Lehrach
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

7.  RHO--radiation hybrid ordering.

Authors:  A Ben-Dor; B Chor; D Pelleg
Journal:  Genome Res       Date:  2000-03       Impact factor: 9.043

8.  A fast and scalable radiation hybrid map construction and integration strategy.

Authors:  R Agarwala; D L Applegate; D Maglott; G D Schuler; A A Schäffer
Journal:  Genome Res       Date:  2000-03       Impact factor: 9.043

9.  Cloning and characterization of IL-17B and IL-17C, two new members of the IL-17 cytokine family.

Authors:  H Li; J Chen; A Huang; J Stinson; S Heldens; J Foster; P Dowd; A L Gurney; W I Wood
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-18       Impact factor: 11.205

10.  Exploiting plant somatic radiation hybrids for physical mapping of expressed sequence tags.

Authors:  J Wardrop; J Fuller; W Powell; G C Machray
Journal:  Theor Appl Genet       Date:  2003-09-25       Impact factor: 5.699

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