Literature DB >> 8041689

Tempo, mode, the progenote, and the universal root.

W F Doolittle1, J R Brown.   

Abstract

Early cellular evolution differed in both mode and tempo from the contemporary process. If modern lineages first began to diverge when the phenotype-genotype coupling was still poorly articulated, then we might be able to learn something about the evolution of that coupling through comparing the molecular biologies of living organisms. The issue is whether the last common ancestor of all life, the cenancestor, was a primitive entity, a progenote, with a more rudimentary genetic information-transfer system. Thinking on this issue is still unsettled. Much depends on the placement of the root of the universal tree and on whether or not lateral transfer renders such rooting meaningless.

Mesh:

Year:  1994        PMID: 8041689      PMCID: PMC44275          DOI: 10.1073/pnas.91.15.6721

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

Review 1.  The nature of the last universal ancestor and the root of the tree of life, still open questions.

Authors:  P Forterre; N Benachenhou-Lahfa; F Confalonieri; M Duguet; C Elie; B Labedan
Journal:  Biosystems       Date:  1992       Impact factor: 1.973

Review 2.  Evolution by acquisition: the case for horizontal gene transfers.

Authors:  M W Smith; D F Feng; R F Doolittle
Journal:  Trends Biochem Sci       Date:  1992-12       Impact factor: 13.807

3.  Genes for tryptophan biosynthesis in the archaebacterium Haloferax volcanii.

Authors:  W L Lam; A Cohen; D Tsouluhas; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

4.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

Review 5.  Early evolution and the origin of eukaryotes.

Authors:  M L Sogin
Journal:  Curr Opin Genet Dev       Date:  1991-12       Impact factor: 5.578

6.  Phylogenetic structure of the prokaryotic domain: the primary kingdoms.

Authors:  C R Woese; G E Fox
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

7.  The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code.

Authors:  W M Fitch; K Upper
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1987

8.  Horizontal transfer of ATPase genes--the tree of life becomes a net of life.

Authors:  E Hilario; J P Gogarten
Journal:  Biosystems       Date:  1993       Impact factor: 1.973

Review 9.  Disparate rates, differing fates: tempo and mode of evolution changed from the Precambrian to the Phanerozoic.

Authors:  J W Schopf
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

10.  Tryptophan gene cluster of Methanobacterium thermoautotrophicum Marburg: molecular cloning and nucleotide sequence of a putative trpEGCFBAD operon.

Authors:  L Meile; R Stettler; R Banholzer; M Kotik; T Leisinger
Journal:  J Bacteriol       Date:  1991-08       Impact factor: 3.490

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  39 in total

1.  The European small subunit ribosomal RNA database.

Authors:  Y Van de Peer; P De Rijk; J Wuyts; T Winkelmans; R De Wachter
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.

Authors:  Michael P Terns; Rebecca M Terns
Journal:  Gene Expr       Date:  2002

Review 3.  The early phases of genetic code origin: conjectures on the evolution of coded catalysis.

Authors:  Massimo Di Giulio
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

4.  The last universal common ancestor (LUCA) and the ancestors of archaea and bacteria were progenotes.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2010-11-16       Impact factor: 2.395

Review 5.  Eukaryotes first: how could that be?

Authors:  Carlos Mariscal; W Ford Doolittle
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-09-26       Impact factor: 6.237

6.  Surfactant assemblies and their various possible roles for the origin(s) of life.

Authors:  Peter Walde
Journal:  Orig Life Evol Biosph       Date:  2006-04-27       Impact factor: 1.950

7.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

Review 8.  Evolutionary perspective on the structure and function of ribonuclease P, a ribozyme.

Authors:  N R Pace; J W Brown
Journal:  J Bacteriol       Date:  1995-04       Impact factor: 3.490

Review 9.  Molecular phylogeny of Metazoa (animals): monophyletic origin.

Authors:  W E Müller
Journal:  Naturwissenschaften       Date:  1995-07

Review 10.  Protein phylogenies and signature sequences: A reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes.

Authors:  R S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

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