Literature DB >> 7929785

Random amplified polymorphic DNA genotyping of Mycobacterium malmoense.

J Kauppinen1, R Mäntyjärvi, M L Katila.   

Abstract

The suitability of random amplified polymorphic DNA-PCR for the detection of differences between Mycobacterium malmoense strains was evaluated. With two of the 32 tested primers seven fingerprint patterns which proved excellent in distinguishing intraspecies variations of M. malmoense were obtained. The combination of the results obtained with the two primers permitted a clear separation of the strains. This technique is useful for analyzing species whose DNA sequences are not known. It can easily be adapted to test any mycobacterial species.

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Year:  1994        PMID： 7929785      PMCID： PMC263812          DOI： 10.1128/jcm.32.7.1827-1829.1994

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  14 in total

1.  DNA amplification fingerprinting using very short arbitrary oligonucleotide primers.

Authors:  G Caetano-Anollés; B J Bassam; P M Gresshoff
Journal:  Biotechnology (N Y)       Date:  1991-06

2.  Parentage analysis using RAPD PCR.

Authors:  M P Scott; K M Haymes; S M Williams
Journal:  Nucleic Acids Res       Date:  1992-10-25       Impact factor: 16.971

3.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

4.  Chromosomal DNA fingerprint patterns produced with IS6110 as strain-specific markers for epidemiologic study of tuberculosis.

Authors:  G H Mazurek; M D Cave; K D Eisenach; R J Wallace; J H Bates; J T Crawford
Journal:  J Clin Microbiol       Date:  1991-09       Impact factor: 5.948

5.  Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology.

Authors:  J D van Embden; M D Cave; J T Crawford; J W Dale; K D Eisenach; B Gicquel; P Hermans; C Martin; R McAdam; T M Shinnick
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

6.  Chemotypes of Mycobacterium malmoense based on glycolipid profiles.

Authors:  M L Katila; E Brander; E Jantzen; R Huttunen; L Linkosalo
Journal:  J Clin Microbiol       Date:  1991-02       Impact factor: 5.948

7.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

8.  Rapid, simple method for typing isolates of Mycobacterium tuberculosis by using the polymerase chain reaction.

Authors:  B C Ross; B Dwyer
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

9.  The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex.

Authors:  J J McFadden; P D Butcher; J Thompson; R Chiodini; J Hermon-Taylor
Journal:  Mol Microbiol       Date:  1987-11       Impact factor: 3.501

10.  Insertion element IS986 from Mycobacterium tuberculosis: a useful tool for diagnosis and epidemiology of tuberculosis.

Authors:  P W Hermans; D van Soolingen; J W Dale; A R Schuitema; R A McAdam; D Catty; J D van Embden
Journal:  J Clin Microbiol       Date:  1990-09       Impact factor: 5.948
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  9 in total

1.  Molecular epidemiology of Mycobacterium malmoense infections in Scotland.

Authors:  C Doig; L Muckersie; B Watt; K J Forbes
Journal:  J Clin Microbiol       Date:  2002-03       Impact factor: 5.948

2.  Use of randomly amplified polymorphic DNA as a means of developing genus- and strain-specific Streptomyces DNA probes.

Authors:  M A Roberts; D L Crawford
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

Review 3.  Methodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other Mycobacteria.

Authors:  Tomasz Jagielski; Alina Minias; Jakko van Ingen; Nalin Rastogi; Anna Brzostek; Anna Żaczek; Jarosław Dziadek
Journal:  Clin Microbiol Rev       Date:  2016-04       Impact factor: 26.132

4.  Mycobacterium malmoense-specific nested PCR based on a conserved sequence detected in random amplified polymorphic DNA fingerprints.

Authors:  J Kauppinen; R Mäntyjärvi; M L Katila
Journal:  J Clin Microbiol       Date:  1999-05       Impact factor: 5.948

5.  Randomly amplified polymorphic DNA PCR for comparison of Mycobacterium abscessus strains from nosocomial outbreaks.

Authors:  Y Zhang; M Rajagopalan; B A Brown; R J Wallace
Journal:  J Clin Microbiol       Date:  1997-12       Impact factor: 5.948

6.  Genetic basis for clarithromycin resistance among isolates of Mycobacterium chelonae and Mycobacterium abscessus.

Authors:  R J Wallace; A Meier; B A Brown; Y Zhang; P Sander; G O Onyi; E C Böttger
Journal:  Antimicrob Agents Chemother       Date:  1996-07       Impact factor: 5.191

7.  Efficient discrimination of Mycobacterium tuberculosis strains by 16S-23S spacer region-based random amplified polymorphic DNA analysis.

Authors:  Y Abed; A Davin-Regli; C Bollet; P De Micco
Journal:  J Clin Microbiol       Date:  1995-05       Impact factor: 5.948

8.  Antimicrobial susceptibilities and molecular epidemiology of Salmonella enterica serotype enteritidis strains isolated in Hong Kong from 1986 to 1996.

Authors:  J M Ling; I C Koo; K M Kam; A F Cheng
Journal:  J Clin Microbiol       Date:  1998-06       Impact factor: 5.948

Review 9.  Current methods in the molecular typing of Mycobacterium tuberculosis and other mycobacteria.

Authors:  Tomasz Jagielski; Jakko van Ingen; Nalin Rastogi; Jarosław Dziadek; Paweł K Mazur; Jacek Bielecki
Journal:  Biomed Res Int       Date:  2014-01-05       Impact factor: 3.411
  9 in total

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