Literature DB >> 7542275

Efficient discrimination of Mycobacterium tuberculosis strains by 16S-23S spacer region-based random amplified polymorphic DNA analysis.

Y Abed1, A Davin-Regli, C Bollet, P De Micco.   

Abstract

Amplification of the region separating the genes coding for 16S and 23S rRNA was performed with 15 Mycobacterium tuberculosis isolates and the type strain, ATCC 27294. Reproducible amplification patterns were obtained. PCR products were then used as target DNA for random amplified polymorphic DNA (RAPD) analysis. The discriminatory power was higher than when whole genomic DNA was used as a RAPD template. 16S-23S spacer region-based RAPD analysis was a simple and efficient method of differentiation. Consequently, it may be a useful tool for epidemiologic studies of tuberculosis.

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Year:  1995        PMID： 7542275      PMCID： PMC228183          DOI： 10.1128/jcm.33.5.1418-1420.1995

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  15 in total

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Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

5.  Chromosomal DNA fingerprint patterns produced with IS6110 as strain-specific markers for epidemiologic study of tuberculosis.

Authors:  G H Mazurek; M D Cave; K D Eisenach; R J Wallace; J H Bates; J T Crawford
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6.  Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms.

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7.  DNA polymorphisms in strains of Mycobacterium tuberculosis analyzed by pulsed-field gel electrophoresis: a tool for epidemiology.

Authors:  Y Zhang; G H Mazurek; M D Cave; K D Eisenach; Y Pang; D T Murphy; R J Wallace
Journal:  J Clin Microbiol       Date:  1992-06       Impact factor: 5.948

8.  DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting.

Authors:  N Akopyanz; N O Bukanov; T U Westblom; S Kresovich; D E Berg
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

9.  Genomic fingerprinting of "Haemophilus somnus" isolates by using a random-amplified polymorphic DNA assay.

Authors:  L E Myers; S V Silva; J D Procunier; P B Little
Journal:  J Clin Microbiol       Date:  1993-03       Impact factor: 5.948

10.  Random amplified polymorphic DNA genotyping of Mycobacterium malmoense.

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4.  Discrimination of Mycobacterium tuberculosis strains by PCR.

Authors:  R Frothingham
Journal:  J Clin Microbiol       Date:  1995-10       Impact factor: 5.948

5.  Can random amplified polymorphic DNA analysis of the 16S-23S spacer region of Mycobacterium tuberculosis differentiate between isolates?

Authors:  M Glennon; T Smith
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6.  Randomly amplified polymorphic DNA PCR for comparison of Mycobacterium abscessus strains from nosocomial outbreaks.

Authors:  Y Zhang; M Rajagopalan; B A Brown; R J Wallace
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7.  Chemolithotrophic bacteria in copper ores leached at high sulfuric Acid concentration.

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Review 8.  Molecular Strain Typing of Mycobacterium tuberculosis: a Review of Frequently Used Methods.

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Review 9.  Current methods in the molecular typing of Mycobacterium tuberculosis and other mycobacteria.

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  9 in total

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