Literature DB >> 7909515

Evidence that the pathway of transferrin receptor mRNA degradation involves an endonucleolytic cleavage within the 3' UTR and does not involve poly(A) tail shortening.

R Binder1, J A Horowitz, J P Basilion, D M Koeller, R D Klausner, J B Harford.   

Abstract

The stability of transferrin receptor (TfR) mRNA is regulated by iron availability. When a human plasma-cytoma cell line (ARH-77) is treated with an iron source (hemin), the TfR mRNA is destabilized and a shorter TfR RNA appears. A similar phenomenon is also observed in mouse fibroblasts expressing a previously characterized iron-regulated human TfR mRNA (TRS-1). In contrast, mouse cells expressing a constitutively unstable human TfR mRNA (TRS-4) display the shorter RNA irrespective of iron treatment. These shorter RNAs found in both the hemin-treated ARH-77 cells and in the mouse fibroblasts are shown to be the result of a truncation within the 3' untranslated regions of the mRNAs. The truncated RNA is generated by an endonuclease, as most clearly evidenced by the detection of the matching 3' endonuclease product. The cleavage site of the human TfR mRNA in the mouse fibroblasts has been mapped to single nucleotide resolution to a single-stranded region near one of the iron-responsive elements contained in the 3' UTR. Site-directed mutagenesis demonstrates that the sequence surrounding the mapped endonuclease cleavage site is required for both iron-regulated mRNA turnover and generation of the truncated degradation intermediate. The TfR mRNA does not undergo poly(A) tail shortening prior to rapid degradation since the length of the poly(A) tail does not decrease during iron-induced destabilization. Moreover, the 3' endonuclease cleavage product is apparently polyadenylated to the same extent as the full-length mRNA.

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Year:  1994        PMID: 7909515      PMCID: PMC395039          DOI: 10.1002/j.1460-2075.1994.tb06466.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  50 in total

1.  A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation.

Authors:  G Shaw; R Kamen
Journal:  Cell       Date:  1986-08-29       Impact factor: 41.582

2.  Histone mRNA degradation in vivo: the first detectable step occurs at or near the 3' terminus.

Authors:  J Ross; S W Peltz; G Kobs; G Brewer
Journal:  Mol Cell Biol       Date:  1986-12       Impact factor: 4.272

3.  Studies on transferrin receptor expression in mouse plasmacytoma cells.

Authors:  L M Neckers; R Nordan; S Bauer; M Potter
Journal:  Curr Top Microbiol Immunol       Date:  1986       Impact factor: 4.291

4.  A stem-loop in the 3' untranslated region mediates iron-dependent regulation of transferrin receptor mRNA stability in the cytoplasm.

Authors:  E W Müllner; L C Kühn
Journal:  Cell       Date:  1988-06-03       Impact factor: 41.582

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

6.  Sequence-specific adenylations and deadenylations accompany changes in the translation of maternal messenger RNA after fertilization of Spisula oocytes.

Authors:  E T Rosenthal; T R Tansey; J V Ruderman
Journal:  J Mol Biol       Date:  1983-05-25       Impact factor: 5.469

7.  The interaction between the iron-responsive element binding protein and its cognate RNA is highly dependent upon both RNA sequence and structure.

Authors:  S R Jaffrey; D J Haile; R D Klausner; J B Harford
Journal:  Nucleic Acids Res       Date:  1993-09-25       Impact factor: 16.971

8.  Two genetic loci participate in the regulation by iron of the gene for the human transferrin receptor.

Authors:  J L Casey; B Di Jeso; K Rao; R D Klausner; J B Harford
Journal:  Proc Natl Acad Sci U S A       Date:  1988-03       Impact factor: 11.205

9.  Iron-responsive elements: regulatory RNA sequences that control mRNA levels and translation.

Authors:  J L Casey; M W Hentze; D M Koeller; S W Caughman; T A Rouault; R D Klausner; J B Harford
Journal:  Science       Date:  1988-05-13       Impact factor: 47.728

10.  Poly(A) shortening and degradation of the 3' A+U-rich sequences of human c-myc mRNA in a cell-free system.

Authors:  G Brewer; J Ross
Journal:  Mol Cell Biol       Date:  1988-04       Impact factor: 4.272

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  91 in total

1.  Identification of in vivo mRNA decay intermediates corresponding to sites of in vitro cleavage by polysomal ribonuclease 1.

Authors:  M N Hanson; D R Schoenberg
Journal:  J Biol Chem       Date:  2001-01-04       Impact factor: 5.157

2.  Identification of an erythroid-enriched endoribonuclease activity involved in specific mRNA cleavage.

Authors:  Z Wang; M Kiledjian
Journal:  EMBO J       Date:  2000-01-17       Impact factor: 11.598

3.  Vigilin binding selectively inhibits cleavage of the vitellogenin mRNA 3'-untranslated region by the mRNA endonuclease polysomal ribonuclease 1.

Authors:  K S Cunningham; R E Dodson; M A Nagel; D J Shapiro; D R Schoenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

4.  Coordinate control of translation and localization of Vg1 mRNA in Xenopus oocytes.

Authors:  J E Wilhelm; R D Vale; R S Hegde
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

5.  Degradation of the unstable EP1 mRNA in Trypanosoma brucei involves initial destruction of the 3'-untranslated region.

Authors:  H Irmer; C Clayton
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

6.  BSF binds specifically to the bicoid mRNA 3' untranslated region and contributes to stabilization of bicoid mRNA.

Authors:  R Mancebo; X Zhou; W Shillinglaw; W Henzel; P M Macdonald
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

Review 7.  MRNA stability and the control of gene expression: implications for human disease.

Authors:  Elysia M Hollams; Keith M Giles; Andrew M Thomson; Peter J Leedman
Journal:  Neurochem Res       Date:  2002-10       Impact factor: 3.996

8.  The poly(A)-binding protein and an mRNA stability protein jointly regulate an endoribonuclease activity.

Authors:  Z Wang; M Kiledjian
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

9.  An endonuclease activity similar to Xenopus PMR1 catalyzes the degradation of normal and nonsense-containing human beta-globin mRNA in erythroid cells.

Authors:  Kirsten A Bremer; Audrey Stevens; Daniel R Schoenberg
Journal:  RNA       Date:  2003-09       Impact factor: 4.942

Review 10.  All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay.

Authors:  Joel G Belasco
Journal:  Nat Rev Mol Cell Biol       Date:  2010-06-03       Impact factor: 94.444

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