Literature DB >> 7889409

A locus control region in the T cell receptor alpha/delta locus.

P Diaz1, D Cado, A Winoto.   

Abstract

A locus control region (LCR) is a set of cis-acting elements that regulate chromatin accessibility of a gene locus. In the T cell receptor (TCR) alpha/delta locus, an LCR might regulate the differential tissue and developmental expression and the rearrangement of TCR alpha and delta genes. We have localized a region 3' of the TCR alpha/delta locus containing eight T cell-specific nuclease hypersensitive domains (HS-1 to HS-8), which fit the characteristics of an LCR. In transgenic mice, a TCR alpha gene linked to this region is expressed at a high level, independent of the site of integration and correlates with gene copy number. The transgene is expressed in the alpha beta but not the gamma delta T cell subset and is activated at the right time during development. Proper LCR function requires the region containing HS-2 to HS-6. We propose a model of LCR competition to explain the differential regulation of TCR alpha versus delta genes during development.

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Year:  1994        PMID: 7889409     DOI: 10.1016/1074-7613(94)90099-x

Source DB:  PubMed          Journal:  Immunity        ISSN: 1074-7613            Impact factor:   31.745


  28 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

Review 5.  Locus control regions.

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8.  Adapting in vitro embryonic stem cell differentiation to the study of locus control regions.

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Journal:  J Immunol Methods       Date:  2014-03-26       Impact factor: 2.303

Review 9.  Using the ENCODE Resource for Functional Annotation of Genetic Variants.

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Journal:  Cold Spring Harb Protoc       Date:  2015-03-11

10.  Master transcription factors and mediator establish super-enhancers at key cell identity genes.

Authors:  Warren A Whyte; David A Orlando; Denes Hnisz; Brian J Abraham; Charles Y Lin; Michael H Kagey; Peter B Rahl; Tong Ihn Lee; Richard A Young
Journal:  Cell       Date:  2013-04-11       Impact factor: 41.582

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