Literature DB >> 7849022

Composition and sequence specific resonance assignments of the heterogeneous N-linked glycan in the 13.6 kDa adhesion domain of human CD2 as determined by NMR on the intact glycoprotein.

D F Wyss1, J S Choi, G Wagner.   

Abstract

CD2, a T cell specific surface adhesion receptor, is critically important for T lymphocytes to mediate their regulatory and effector functions. The amino terminal domain of human CD2 is responsible for cell adhesion, binding to CD58 on antigen-presenting cells or target cells. This adhesion domain in human CD2 contains a single high-mannose N-glycan. This carbohydrate or part of it appears to be required to maintain the native conformation of the polypeptide and its ability to bind CD58. To better understand the structural aspects that regulate human CD2 adhesion functions, we had previously determined the solution structure of the protein part of the N-glycosylated adhesion domain of human CD2 (hu-sCD2(105); MW approximately 13.6 kDa) by NMR spectroscopy. Here, we have identified protein--carbohydrate and carbohydrate--carbohydrate interactions and, in combination with previous knowledge from electrospray ionization mass spectrometry, have determined the composition of the heterogeneous high-mannose glycan in hu-sCD2(105). These contacts clearly define the carbohydrate's orientation with respect to the protein. The NMR data further suggest that one arm of the glycan is folded toward the trisaccharide core consisting of GlcNAc1-GlcNAc2-Man3. A detailed comparison between chemical shift data of free model oligosaccharides with those of the glycomers present in our hu-sCD2(105) sample reveals that only the resonances of the two GlcNAc residues are significantly different from those of free high-mannose glycans. This work was based on a new strategy to achieve sequential assignments of the 1H and 13C resonances of the heterogeneous high-mannose carbohydrate [(Man)nGlcNAc2, n = 5-8] in hu-sCD2(105) on the intact glycoprotein using a combination of homonuclear 1H-1H and heteronuclear 1H-13C NMR experiments at natural abundance.

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Year:  1995        PMID: 7849022     DOI: 10.1021/bi00005a019

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

1.  The counterreceptor binding site of human CD2 exhibits an extended surface patch with multiple conformations fluctuating with millisecond to microsecond motions.

Authors:  D F Wyss; K T Dayie; G Wagner
Journal:  Protein Sci       Date:  1997-03       Impact factor: 6.725

Review 2.  Paramagnetic NMR probes for characterization of the dynamic conformations and interactions of oligosaccharides.

Authors:  Koichi Kato; Takumi Yamaguchi
Journal:  Glycoconj J       Date:  2015-06-07       Impact factor: 2.916

3.  1H and 13C NMR assignments for the glycans in glycoproteins by using 2H/13C-labeled glucose as a metabolic precursor.

Authors:  Y Yamaguchi; T Takizawa; K Kato; Y Arata; I Shimada
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

4.  Enhanced production and isotope enrichment of recombinant glycoproteins produced in cultured mammalian cells.

Authors:  David Skelton; Abbey Goodyear; Daqun Ni; Wendy J Walton; Myron Rolle; Joan T Hare; Timothy M Logan
Journal:  J Biomol NMR       Date:  2010-08-04       Impact factor: 2.835

5.  N-glycosylation of enhanced aromatic sequons to increase glycoprotein stability.

Authors:  Joshua L Price; Elizabeth K Culyba; Wentao Chen; Amber N Murray; Sarah R Hanson; Chi-Huey Wong; Evan T Powers; Jeffery W Kelly
Journal:  Biopolymers       Date:  2012-02-03       Impact factor: 2.505

6.  Branch-specific sialylation of IgG-Fc glycans by ST6Gal-I.

Authors:  Adam W Barb; Evan K Brady; James H Prestegard
Journal:  Biochemistry       Date:  2009-10-20       Impact factor: 3.162

7.  Dynamics of the carbohydrate chains attached to the Fc portion of immunoglobulin G as studied by NMR spectroscopy assisted by selective 13C labeling of the glycans.

Authors:  Y Yamaguchi; K Kato; M Shindo; S Aoki; K Furusho; K Koga; N Takahashi; Y Arata; I Shimada
Journal:  J Biomol NMR       Date:  1998-10       Impact factor: 2.835

8.  13C-sialic acid labeling of glycans on glycoproteins using ST6Gal-I.

Authors:  Megan A Macnaughtan; Fang Tian; Shan Liu; Lu Meng; Seongha Park; Parastoo Azadi; Kelley W Moremen; James H Prestegard
Journal:  J Am Chem Soc       Date:  2008-08-14       Impact factor: 15.419

9.  Chemical Structure and Composition of Major Glycans Covalently Linked to Therapeutic Monoclonal Antibodies by Middle-Down Nuclear Magnetic Resonance.

Authors:  Jiangnan Peng; Sharadrao M Patil; David A Keire; Kang Chen
Journal:  Anal Chem       Date:  2018-08-27       Impact factor: 6.986

10.  Analysis and validation of carbohydrate three-dimensional structures.

Authors:  Thomas Lütteke
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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