Literature DB >> 11200530

1H and 13C NMR assignments for the glycans in glycoproteins by using 2H/13C-labeled glucose as a metabolic precursor.

Y Yamaguchi1, T Takizawa, K Kato, Y Arata, I Shimada.   

Abstract

In order to understand the role of the glycans in glycoproteins in solution, structural information obtained by NMR spectroscopy is obviously required. However, the assignment of the NMR signals from the glycans in larger glycoproteins is still difficult, mainly due to the lack of appropriate methods for the assignment of the resonances originating from the glycans. By using [U-13C6, 2H7]glucose as a metabolic precursor, we have successfully prepared a glycoprotein whose glycan is uniformly labeled with 13C and partially with D at the sugar residues. The D to H exchange ratios at the C1-C6 positions of the sugar residues have been proven to provide useful information for the spectral assignments of the glycan in the glycoprotein. This is the first report on the residue-specific assignment of the anomeric resonances originating from a glycan attached to a glycoprotein by using the metabolic incorporation of hydrogen from the medium into a glycan labeled with [U-13C6, 2H7]glucose.

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Year:  2000        PMID: 11200530     DOI: 10.1023/a:1026776721348

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  25 in total

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Journal:  Biochemistry       Date:  1995-02-07       Impact factor: 3.162

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Journal:  Glycobiology       Date:  1993-04       Impact factor: 4.313

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  5 in total

1.  Assignment of selectively 13C-labeled cellopentaose synthesized using an engineered glycosynthase.

Authors:  E Brun; H Brumer; L F MacKenzie; S G Withers; L P McIntosh
Journal:  J Biomol NMR       Date:  2001-09       Impact factor: 2.835

Review 2.  Recent advances in segmental isotope labeling of proteins: NMR applications to large proteins and glycoproteins.

Authors:  Lenka Skrisovska; Mario Schubert; Frédéric H-T Allain
Journal:  J Biomol NMR       Date:  2009-08-19       Impact factor: 2.835

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Journal:  J Biol Chem       Date:  2011-08-18       Impact factor: 5.157

4.  Chemical Structure and Composition of Major Glycans Covalently Linked to Therapeutic Monoclonal Antibodies by Middle-Down Nuclear Magnetic Resonance.

Authors:  Jiangnan Peng; Sharadrao M Patil; David A Keire; Kang Chen
Journal:  Anal Chem       Date:  2018-08-27       Impact factor: 6.986

5.  Decoding human-macaque interspecies differences in Fc-effector functions: The structural basis for CD16-dependent effector function in Rhesus macaques.

Authors:  William D Tolbert; Neelakshi Gohain; Paul G Kremer; Andrew P Hederman; Dung N Nguyen; Verna Van; Rebekah Sherburn; George K Lewis; Andrés Finzi; Justin Pollara; Margaret E Ackerman; Adam W Barb; Marzena Pazgier
Journal:  Front Immunol       Date:  2022-09-05       Impact factor: 8.786

  5 in total

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