Literature DB >> 7822887

A probabilistic model for detecting coding regions in DNA sequences.

A Thomas1, M H Skolnick.   

Abstract

A probabilistic model is presented to predict whether or not an anonymous sequence of DNA contains exons. The method is shown to be at least as reliable as Grail, a well-known neural network solution to the problem, and to be significantly more amenable to customization for specific prediction problems.

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Year:  1994        PMID： 7822887     DOI： 10.1093/imammb/11.3.149

Source DB:  PubMed          Journal:  IMA J Math Appl Med Biol        ISSN： 0265-0746


  13 in total

Review 1.  Annotating sequence data using Genotator.

Authors:  N L Harris
Journal:  Mol Biotechnol       Date:  2000-11       Impact factor: 2.695

Review 2.  Current methods of gene prediction, their strengths and weaknesses.

Authors:  Catherine Mathé; Marie-France Sagot; Thomas Schiex; Pierre Rouzé
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

3.  Monitoring the efficacy of hybrid selection during positional cloning: the search for BRCA1.

Authors:  T Hattier; R Bell; D Shaffer; S Stone; R S Phelps; S V Tavtigian; M H Skolnick; D Shattuck-Eidens; A Kamb
Journal:  Mamm Genome       Date:  1995-12       Impact factor: 2.957

4.  Representation of cloned genomic sequences in two sequencing vectors: correlation of DNA sequence and subclone distribution.

Authors:  S L Chissoe; M A Marra; L Hillier; R Brinkman; R K Wilson; R H Waterston
Journal:  Nucleic Acids Res       Date:  1997-08-01       Impact factor: 16.971

5.  Genotator: a workbench for sequence annotation.

Authors:  N L Harris
Journal:  Genome Res       Date:  1997-07       Impact factor: 9.043

6.  Genome sequence of bovine herpesvirus 4, a bovine Rhadinovirus, and identification of an origin of DNA replication.

Authors:  W Zimmermann; H Broll; B Ehlers; H J Buhk; A Rosenthal; M Goltz
Journal:  J Virol       Date:  2001-02       Impact factor: 5.103

7.  The mouse Aire gene: comparative genomic sequencing, gene organization, and expression.

Authors:  K Blechschmidt; M Schweiger; K Wertz; R Poulson; H M Christensen; A Rosenthal; H Lehrach; M L Yaspo
Journal:  Genome Res       Date:  1999-02       Impact factor: 9.043

8.  Large-scale sequencing of two regions in human chromosome 7q22: analysis of 650 kb of genomic sequence around the EPO and CUTL1 loci reveals 17 genes.

Authors:  G Glöckner; S Scherer; R Schattevoy; A Boright; J Weber; L C Tsui; A Rosenthal
Journal:  Genome Res       Date:  1998-10       Impact factor: 9.043

9.  Construction of an approximately 700-kb transcript map around the familial Mediterranean fever locus on human chromosome 16p13.3.

Authors:  M Centola; X Chen; R Sood; Z Deng; I Aksentijevich; T Blake; D O Ricke; X Chen; G Wood; N Zaks; N Richards; D Krizman; E Mansfield; S Apostolou; J Liu; N Shafran; A Vedula; M Hamon; A Cercek; T Kahan; D Gumucio; D F Callen; R I Richards; R K Moyzis; N A Doggett; F S Collins; P P Liu; N Fischel-Ghodsian; D L Kastner
Journal:  Genome Res       Date:  1998-11       Impact factor: 9.043

10.  [Chromosomal localization and molecular organization of human genomic fragment containing TNF/LT locus in transgenic mice].

Authors:  A R Galimov; A A Kruglov; N L Bol'sheva; O Iu Iurkevich; D Ia Lipin'sh; I A Mufazalov; D V Kuprash; S A Nedospasov
Journal:  Mol Biol (Mosk)       Date:  2008 Jul-Aug
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