Literature DB >> 7809133

Construction of a bisaquo heme enzyme and binding by exogenous ligands.

D E McRee1, G M Jensen, M M Fitzgerald, H A Siegel, D B Goodin.   

Abstract

The crystal structure of the His-175-->Gly (H175G) mutant of cytochrome-c peroxidase (EC 1.11.1.5), missing its only heme ligand, reveals that the histidine is replaced by solvent to give a bisaquo heme protein. This protein retains some residual activity, which can be stimulated or inhibited by addition of exogenous ligands. Structural analysis confirms the binding of imidazole to the heme at the position of the wild-type histidine ligand. This imidazole complex reacts readily with hydrogen peroxide to produce a radical species with novel properties. However, reactivation in this complex is incomplete (approximately 5%), which, in view of the very similar structures of the wild-type and the H175G/imidazole forms, implies a critical role for tethering of the axial ligand in catalysis. This study demonstrates the feasibility of constructing heme enzymes with no covalent link to the protein and with unnatural ligand replacements. Such enzymes may prove useful in studies of electron transfer mechanisms and in the engineering of novel heme-based catalysts.

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Year:  1994        PMID: 7809133      PMCID: PMC45537          DOI: 10.1073/pnas.91.26.12847

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Electron-tunneling pathways in proteins.

Authors:  D N Beratan; J N Onuchic; J R Winkler; H B Gray
Journal:  Science       Date:  1992-12-11       Impact factor: 47.728

2.  Amino acid substitutions at tryptophan-51 of cytochrome c peroxidase: effects on coordination, species preference for cytochrome c, and electron transfer.

Authors:  D B Goodin; M G Davidson; J A Roe; A G Mauk; M Smith
Journal:  Biochemistry       Date:  1991-05-21       Impact factor: 3.162

3.  Identification by ENDOR of Trp191 as the free-radical site in cytochrome c peroxidase compound ES.

Authors:  M Sivaraja; D B Goodin; M Smith; B M Hoffman
Journal:  Science       Date:  1989-08-18       Impact factor: 47.728

4.  Probing structure-function relations in heme-containing oxygenases and peroxidases.

Authors:  J H Dawson
Journal:  Science       Date:  1988-04-22       Impact factor: 47.728

5.  The peroxide complex of yeast cytochrome c peroxidase contains two distinct radical species, neither of which resides at methionine 172 or tryptophan 51.

Authors:  D B Goodin; A G Mauk; M Smith
Journal:  J Biol Chem       Date:  1987-06-05       Impact factor: 5.157

6.  Site-directed mutagenesis of Azotobacter vinelandii ferredoxin I: [Fe-S] cluster-driven protein rearrangement.

Authors:  A E Martín; B K Burgess; C D Stout; V L Cash; D R Dean; G M Jensen; P J Stephens
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

7.  Compound I radical in site-directed mutants of cytochrome c peroxidase as probed by electron paramagnetic resonance and electron-nuclear double resonance.

Authors:  L A Fishel; M F Farnum; J M Mauro; M A Miller; J Kraut; Y J Liu; X L Tan; C P Scholes
Journal:  Biochemistry       Date:  1991-02-19       Impact factor: 3.162

8.  Conversion of the proximal histidine ligand to glutamine restores activity to an inactive mutant of cytochrome c peroxidase.

Authors:  K Choudhury; M Sundaramoorthy; J M Mauro; T L Poulos
Journal:  J Biol Chem       Date:  1992-12-25       Impact factor: 5.157

9.  A cavity-containing mutant of T4 lysozyme is stabilized by buried benzene.

Authors:  A E Eriksson; W A Baase; J A Wozniak; B W Matthews
Journal:  Nature       Date:  1992-01-23       Impact factor: 49.962

10.  Spectroscopic studies of myoglobin at low pH: heme structure and ligation.

Authors:  J T Sage; D Morikis; P M Champion
Journal:  Biochemistry       Date:  1991-02-05       Impact factor: 3.162

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  12 in total

1.  Excision of a proposed electron transfer pathway in cytochrome c peroxidase and its replacement by a ligand-binding channel.

Authors:  Robin J Rosenfeld; Anna-Maria A Hays; Rabi A Musah; David B Goodin
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

2.  Trapping of peptide-based surrogates in an artificially created channel of cytochrome c peroxidase.

Authors:  Anna-Maria A Hays; Harry B Gray; David B Goodin
Journal:  Protein Sci       Date:  2003-02       Impact factor: 6.725

3.  The H93G Myoglobin Cavity Mutant as a Versatile Scaffold for Modeling Heme Iron Coordination Structures in Protein Active Sites and Their Characterization with Magnetic Circular Dichroism Spectroscopy.

Authors:  Jing Du; Masanori Sono; John H Dawson
Journal:  Coord Chem Rev       Date:  2011-04-01       Impact factor: 22.315

4.  Low-frequency resonance Raman studies of the H(M202)G cavity mutant of bacterial photosynthetic reaction centers.

Authors:  Kazimierz Czarnecki; Lei Chen; James R Diers; Harry A Frank; David F Bocian
Journal:  Photosynth Res       Date:  2006-01-26       Impact factor: 3.573

5.  Characterization of structure and activity of garlic peroxidase (POX(1B)).

Authors:  Sarra El Ichi; Anna Miodek; Hélène Sauriat-Dorizon; Jean-Pierre Mahy; Céline Henry; Mohamed Nejib Marzouki; Hafsa Korri-Youssoufi
Journal:  J Biol Inorg Chem       Date:  2010-11-02       Impact factor: 3.358

6.  The hydrogenase cytochrome b heme ligands of Azotobacter vinelandii are required for full H(2) oxidation capability.

Authors:  L Meek; D J Arp
Journal:  J Bacteriol       Date:  2000-06       Impact factor: 3.490

7.  On the role of the axial ligand in heme proteins: a theoretical study.

Authors:  Patrik Rydberg; Emma Sigfridsson; Ulf Ryde
Journal:  J Biol Inorg Chem       Date:  2004-01-15       Impact factor: 3.358

8.  The role of aspartate-235 in the binding of cations to an artificial cavity at the radical site of cytochrome c peroxidase.

Authors:  M M Fitzgerald; M L Trester; G M Jensen; D E McRee; D B Goodin
Journal:  Protein Sci       Date:  1995-09       Impact factor: 6.725

9.  Impact of Proximal and Distal Pocket Site-Directed Mutations on the Ferric/Ferrous Heme Redox Potential of Yeast Cytochrome-c-Peroxidase.

Authors:  G M Jensen; D B Goodin
Journal:  Theor Chem Acc       Date:  2011-12       Impact factor: 1.702

10.  New Frontiers in Druggability.

Authors:  Dima Kozakov; David R Hall; Raeanne L Napoleon; Christine Yueh; Adrian Whitty; Sandor Vajda
Journal:  J Med Chem       Date:  2015-08-11       Impact factor: 7.446

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