Literature DB >> 21423881

The H93G Myoglobin Cavity Mutant as a Versatile Scaffold for Modeling Heme Iron Coordination Structures in Protein Active Sites and Their Characterization with Magnetic Circular Dichroism Spectroscopy.

Jing Du1, Masanori Sono, John H Dawson.   

Abstract

Preparation of heme model complexes is a challenging subject of long-standing interest for inorganic chemists. His93Gly sperm whale myoglobin (H93G Mb) has the proximal His replaced with the much smaller non-coordinating Gly. This leaves a cavity on the proximal side of the heme into which a wide variety of exogenous ligands can be delivered. The end result is a remarkably versatile scaffold for the preparation of model heme adducts to mimic the heme iron coordination structure of native heme proteins. In this review, we first summarize the quantitative evidence for differential ligand binding affinities of the proximal and distal pockets of the H93G Mb cavity mutant that facilitates the preparation of mixed-ligand derivatives. Then we review our use of magnetic circular dichroism and electronic absorption spectroscopy to characterize nitrogen-, oxygen-, and sulfur-donor-ligated H93G Mb adducts with an emphasis on species not easily prepared by other heme model system approaches and those that serve as spectroscopic models for native heme proteins.

Entities:  

Year:  2011        PMID: 21423881      PMCID: PMC3060032          DOI: 10.1016/j.ccr.2011.01.029

Source DB:  PubMed          Journal:  Coord Chem Rev        ISSN: 0010-8545            Impact factor:   22.315


  63 in total

1.  Formation of a Five-Coordinate Hydroxide-Bound Heme in the His93Gly Mutant of Sperm Whale Myoglobin.

Authors:  Tapan Kanti Das; Stefan Franzen; Alycen Pond; John H. Dawson; Denis L. Rousseau
Journal:  Inorg Chem       Date:  1999-05-03       Impact factor: 5.165

2.  Unnatural amino acid mutagenesis: a precise tool for probing protein structure and function.

Authors:  Pamela M England
Journal:  Biochemistry       Date:  2004-09-21       Impact factor: 3.162

3.  Letter: Oxidized cytochrome P-450. Magnetic circular dichroism evidence for thiolate ligation in the substrate-bound form. Implications for the catalytic mechanism.

Authors:  J H Dawson; R H Holm; J R Trudell; G Barth; R E Linder; E Bunnenberg; C Djerassi; S C Tang
Journal:  J Am Chem Soc       Date:  1976-06-09       Impact factor: 15.419

4.  A novel heme protein that acts as a carbon monoxide-dependent transcriptional activator in Rhodospirillum rubrum.

Authors:  S Aono; H Nakajima; K Saito; M Okada
Journal:  Biochem Biophys Res Commun       Date:  1996-11-21       Impact factor: 3.575

5.  Synthesis of the myoglobin active site.

Authors:  C K Chang; T G Traylor
Journal:  Proc Natl Acad Sci U S A       Date:  1973-09       Impact factor: 11.205

6.  Reduction of methemoglobins M Hyde Park, M Saskatoon, and M Milwaukee by ferredoxin and ferredoxin-nicotinamide adenine dinucleotide phosphate reductase system.

Authors:  M Nagai; Y Yoneyama
Journal:  J Biol Chem       Date:  1983-12-10       Impact factor: 5.157

7.  Hemepeptide models for hemoproteins: the behavior of N-acetylmicroperoxidase-11 in aqueous solution.

Authors:  H M Marques; C B Perry
Journal:  J Inorg Biochem       Date:  1999-07-15       Impact factor: 4.155

8.  The active center of catalase.

Authors:  I Fita; M G Rossmann
Journal:  J Mol Biol       Date:  1985-09-05       Impact factor: 5.469

9.  Identification of histidine 25 as the heme ligand in human liver heme oxygenase.

Authors:  J Sun; T M Loehr; A Wilks; P R Ortiz de Montellano
Journal:  Biochemistry       Date:  1994-11-22       Impact factor: 3.162

10.  The proximal ligand variant His93Tyr of horse heart myoglobin.

Authors:  D P Hildebrand; D L Burk; R Maurus; J C Ferrer; G D Brayer; A G Mauk
Journal:  Biochemistry       Date:  1995-02-14       Impact factor: 3.162

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  10 in total

1.  Characterization of the second conserved domain in the heme uptake protein HtaA from Corynebacterium diphtheriae.

Authors:  Rizvan C Uluisik; Neval Akbas; Gudrun S Lukat-Rodgers; Seth A Adrian; Courtni E Allen; Michael P Schmitt; Kenton R Rodgers; Dabney W Dixon
Journal:  J Inorg Biochem       Date:  2016-11-23       Impact factor: 4.155

Review 2.  Design of artificial metalloproteins/metalloenzymes by tuning noncovalent interactions.

Authors:  Shun Hirota; Ying-Wu Lin
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

3.  Electron Accepting Units of the Diheme Cytochrome c TsdA, a Bifunctional Thiosulfate Dehydrogenase/Tetrathionate Reductase.

Authors:  Julia M Kurth; José A Brito; Jula Reuter; Alexander Flegler; Tobias Koch; Thomas Franke; Eva-Maria Klein; Sam F Rowe; Julea N Butt; Kevin Denkmann; Inês A C Pereira; Margarida Archer; Christiane Dahl
Journal:  J Biol Chem       Date:  2016-09-30       Impact factor: 5.157

4.  Hydrogen bond donation to the heme distal ligand of Staphylococcus aureus IsdG tunes the electronic structure.

Authors:  Cheryl L Lockhart; Matthew A Conger; Dylanger S Pittman; Matthew D Liptak
Journal:  J Biol Inorg Chem       Date:  2015-04-25       Impact factor: 3.358

5.  Redox and chemical activities of the hemes in the sulfur oxidation pathway enzyme SoxAX.

Authors:  Justin M Bradley; Sophie J Marritt; Margaret A Kihlken; Kate Haynes; Andrew M Hemmings; Ben C Berks; Myles R Cheesman; Julea N Butt
Journal:  J Biol Chem       Date:  2012-10-11       Impact factor: 5.157

6.  The Mycobacterium tuberculosis secreted protein Rv0203 transfers heme to membrane proteins MmpL3 and MmpL11.

Authors:  Cedric P Owens; Nicholas Chim; Amanda B Graves; Christine A Harmston; Angelina Iniguez; Heidi Contreras; Matthew D Liptak; Celia W Goulding
Journal:  J Biol Chem       Date:  2013-06-11       Impact factor: 5.157

7.  Binding of S. cerevisiae iso-1 cytochrome c and its surface lysine-to-alanine variants to cardiolipin: charge effects and the role of the lipid to protein ratio.

Authors:  Alessandro Paradisi; Marzia Bellei; Licia Paltrinieri; Carlo Augusto Bortolotti; Giulia Di Rocco; Antonio Ranieri; Marco Borsari; Marco Sola; Gianantonio Battistuzzi
Journal:  J Biol Inorg Chem       Date:  2020-03-18       Impact factor: 3.358

8.  Rational Design of Dual Active Sites in a Single Protein Scaffold: A Case Study of Heme Protein in Myoglobin.

Authors:  Xiao-Gang Shu; Ji-Hu Su; Ke-Jie Du; Yong You; Shu-Qin Gao; Ge-Bo Wen; Xiangshi Tan; Ying-Wu Lin
Journal:  ChemistryOpen       Date:  2016-03-08       Impact factor: 2.911

Review 9.  Nature's nitrite-to-ammonia expressway, with no stop at dinitrogen.

Authors:  Peter M H Kroneck
Journal:  J Biol Inorg Chem       Date:  2021-12-05       Impact factor: 3.358

10.  Enhancement of protein stability by an additional disulfide bond designed in human neuroglobin.

Authors:  Hai-Xiao Liu; Lianzhi Li; Xin-Zhi Yang; Chuan-Wan Wei; Hui-Min Cheng; Shu-Qin Gao; Ge-Bo Wen; Ying-Wu Lin
Journal:  RSC Adv       Date:  2019-01-31       Impact factor: 4.036

  10 in total

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