Literature DB >> 7773177

Mutations of surface residues in Anabaena vegetative and heterocyst ferredoxin that affect thermodynamic stability as determined by guanidine hydrochloride denaturation.

J K Hurley1, M S Caffrey, J L Markley, H Cheng, B Xia, Y K Chae, H M Holden, G Tollin.   

Abstract

The stability properties of oxidized wild-type (wt) and site-directed mutants in surface residues of vegetative (Vfd) and heterocyst (Hfd) ferredoxins from Anabaena 7120 have been characterized by guanidine hydrochloride (Gdn-HCl) denaturation. For Vfd it was found that mutants E95K, E94Q, F65Y, F65W, and T48A are quite similar to wt in stability. E94K is somewhat less stable, whereas E94D, F65A, F65I, R42A, and R42H are substantially less stable than wt. R42H is a substitution found in all Hfds, and NMR comparison of the Anabaena 7120 Vfd and Hfd showed the latter to be much less stable on the basis of hydrogen exchange rates (Chae YK, Abildgaard F, Mooberry ES, Markley JL, 1994, Biochemistry 33:3287-3295); we also find this to be true with respect to Gdn-HCl denaturation. Strikingly, the Hfd mutant H42R is more stable than the wt Hfd by precisely the amount of stability lost in Vfd upon mutating R42 to H (2.0 kcal/mol). On the basis of comparison of the X-ray crystal structures of wt Anabaena Vfd and Hfd, the decreased stabilities of F65A and F65I can be ascribed to increased solvent exposure of interior hydrophobic groups. In the case of Vfd mutants E94K and E94D, the decreased stabilities may result from disruption of a hydrogen bond between the E94 and S47 side chains. The instability of the R42 mutants is also most probably due to decreased hydrogen bonding capabilities.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1995        PMID: 7773177      PMCID: PMC2142963          DOI: 10.1002/pro.5560040108

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  23 in total

Review 1.  Ferredoxin-dependent chloroplast enzymes.

Authors:  D B Knaff; M Hirasawa
Journal:  Biochim Biophys Acta       Date:  1991-01-22

2.  Molecular cloning and nucleotide sequence analysis of the gene coding for heterocyst ferredoxin from the cyanobacterium Anabaena sp. strain PCC 7120.

Authors:  H Böhme; R Haselkorn
Journal:  Mol Gen Genet       Date:  1988-10

3.  Determination and analysis of urea and guanidine hydrochloride denaturation curves.

Authors:  C N Pace
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

4.  Interior and surface of monomeric proteins.

Authors:  S Miller; J Janin; A M Lesk; C Chothia
Journal:  J Mol Biol       Date:  1987-08-05       Impact factor: 5.469

5.  Contribution of hydrophobic interactions to protein stability.

Authors:  J T Kellis; K Nyberg; D Sali; A R Fersht
Journal:  Nature       Date:  1988-06-23       Impact factor: 49.962

6.  Urea and guanidine hydrochloride denaturation of ribonuclease, lysozyme, alpha-chymotrypsin, and beta-lactoglobulin.

Authors:  R F Greene; C N Pace
Journal:  J Biol Chem       Date:  1974-09-10       Impact factor: 5.157

7.  The interpretation of protein structures: estimation of static accessibility.

Authors:  B Lee; F M Richards
Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

8.  Structural characterization of protein folding intermediates by proton magnetic resonance and hydrogen exchange.

Authors:  H Roder
Journal:  Methods Enzymol       Date:  1989       Impact factor: 1.600

9.  Estimation of the free energy of stabilization of ribonuclease A, lysozyme, alpha-lactalbumin, and myoglobin.

Authors:  F Ahmad; C C Bigelow
Journal:  J Biol Chem       Date:  1982-11-10       Impact factor: 5.157

10.  Lysines in the amino-terminal alpha-helix are important to the stability of Rhodobacter capsulatus cytochrome c2.

Authors:  M S Caffrey; M A Cusanovich
Journal:  Biochemistry       Date:  1991-09-24       Impact factor: 3.162

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  1 in total

1.  Conformational stability of adrenodoxin mutant proteins.

Authors:  T V Burova; V Beckert; H Uhlmann; O Ristau; R Bernhardt; W Pfeil
Journal:  Protein Sci       Date:  1996-09       Impact factor: 6.725

  1 in total

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