Literature DB >> 7768429

Multiple elements and auto-repression regulate Rox1, a repressor of hypoxic genes in Saccharomyces cerevisiae.

J Deckert1, R Perini, B Balasubramanian, R S Zitomer.   

Abstract

The ROX1 gene encodes a heme-induced repressor of hypoxic genes in yeast. Using RNA blot analysis and a ROX1/lacZ fusion construct that included the ROX1 upstream region and only the first codon, we discovered that Rox1 represses its own expression. Gel-retardation experiments indicated that Rox1 was capable of binding to its own upstream region. Overexpression of Rox1 from the inducible GAL1 promoter was found to be inhibitory to cell growth. Also, we found that, as reported previously, Hap1 is partially responsible for heme-induction of ROX1, but, in addition, it also may play a role in ROX1 repression in the absence of heme. There is a second repressor of anaerobic ROX1 expression that requires the general repressor Tup1/Ssn6 for its function.

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Year:  1995        PMID: 7768429      PMCID: PMC1206446     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  28 in total

1.  A hypoxic consensus operator and a constitutive activation region regulate the ANB1 gene of Saccharomyces cerevisiae.

Authors:  C V Lowry; M E Cerdán; R S Zitomer
Journal:  Mol Cell Biol       Date:  1990-11       Impact factor: 4.272

2.  Anaerobic nutrition of Saccharomyces cerevisiae. I. Ergosterol requirement for growth in a defined medium.

Authors:  A A ANDREASEN; T J B STIER
Journal:  J Cell Comp Physiol       Date:  1953-02

3.  The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures.

Authors:  K Giese; J Cox; R Grosschedl
Journal:  Cell       Date:  1992-04-03       Impact factor: 41.582

4.  Elements involved in oxygen regulation of the Saccharomyces cerevisiae CYC7 gene.

Authors:  R S Zitomer; J W Sellers; D W McCarter; G A Hastings; P Wick; C V Lowry
Journal:  Mol Cell Biol       Date:  1987-06       Impact factor: 4.272

5.  Construction and use of gene fusions to lacZ (beta-galactosidase) that are expressed in yeast.

Authors:  M Rose; D Botstein
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

Review 6.  Communication between mitochondria and the nucleus in regulation of cytochrome genes in the yeast Saccharomyces cerevisiae.

Authors:  S L Forsburg; L Guarente
Journal:  Annu Rev Cell Biol       Date:  1989

7.  A general method for polyethylene-glycol-induced genetic transformation of bacteria and yeast.

Authors:  R J Klebe; J V Harriss; Z D Sharp; M G Douglas
Journal:  Gene       Date:  1983-11       Impact factor: 3.688

8.  The Rox1 repressor of the Saccharomyces cerevisiae hypoxic genes is a specific DNA-binding protein with a high-mobility-group motif.

Authors:  B Balasubramanian; C V Lowry; R S Zitomer
Journal:  Mol Cell Biol       Date:  1993-10       Impact factor: 4.272

9.  A yeast protein with homology to the beta-subunit of G proteins is involved in control of heme-regulated and catabolite-repressed genes.

Authors:  M Zhang; L S Rosenblum-Vos; C V Lowry; K A Boakye; R S Zitomer
Journal:  Gene       Date:  1991-01-15       Impact factor: 3.688

10.  Control of yeast GAL genes by MIG1 repressor: a transcriptional cascade in the glucose response.

Authors:  J O Nehlin; M Carlberg; H Ronne
Journal:  EMBO J       Date:  1991-11       Impact factor: 11.598

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  43 in total

1.  Induction and repression of DAN1 and the family of anaerobic mannoprotein genes in Saccharomyces cerevisiae occurs through a complex array of regulatory sites.

Authors:  B D Cohen; O Sertil; N E Abramova; K J Davies; C V Lowry
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

2.  Combinatorial repression of the hypoxic genes of Saccharomyces cerevisiae by DNA binding proteins Rox1 and Mot3.

Authors:  Lee G Klinkenberg; Thomas A Mennella; Katharina Luetkenhaus; Richard S Zitomer
Journal:  Eukaryot Cell       Date:  2005-04

3.  Synergy among differentially regulated repressors of the ribonucleotide diphosphate reductase genes of Saccharomyces cerevisiae.

Authors:  Lee G Klinkenberg; Travis Webb; Richard S Zitomer
Journal:  Eukaryot Cell       Date:  2006-07

4.  Aca1 and Aca2, ATF/CREB activators in Saccharomyces cerevisiae, are important for carbon source utilization but not the response to stress.

Authors:  M A Garcia-Gimeno; K Struhl
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

5.  The anatomy of a hypoxic operator in Saccharomyces cerevisiae.

Authors:  J Deckert; A M Torres; S M Hwang; A J Kastaniotis; R S Zitomer
Journal:  Genetics       Date:  1998-12       Impact factor: 4.562

6.  Roles of Candida albicans Sfl1 in hyphal development.

Authors:  Yandong Li; Chang Su; Xuming Mao; Fang Cao; Jiangye Chen
Journal:  Eukaryot Cell       Date:  2007-08-22

7.  Mechanism of de novo branched-chain amino acid synthesis as an alternative electron sink in hypoxic Aspergillus nidulans cells.

Authors:  Motoyuki Shimizu; Tatsuya Fujii; Shunsuke Masuo; Naoki Takaya
Journal:  Appl Environ Microbiol       Date:  2010-01-15       Impact factor: 4.792

8.  Recruitment of Tup1-Ssn6 by yeast hypoxic genes and chromatin-independent exclusion of TATA binding protein.

Authors:  Thomas A Mennella; Lee G Klinkenberg; Richard S Zitomer
Journal:  Eukaryot Cell       Date:  2003-12

9.  The effect of prior assumptions over the weights in BayesPI with application to study protein-DNA interactions from ChIP-based high-throughput data.

Authors:  Junbai Wang
Journal:  BMC Bioinformatics       Date:  2010-08-04       Impact factor: 3.169

10.  BayesPI - a new model to study protein-DNA interactions: a case study of condition-specific protein binding parameters for Yeast transcription factors.

Authors:  Junbai Wang
Journal:  BMC Bioinformatics       Date:  2009-10-20       Impact factor: 3.169

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