Literature DB >> 7765565

The behavior of bacteria designed for biodegradation.

J L Ramos1, E Díaz, D Dowling, V de Lorenzo, S Molin, F O'Gara, C Ramos, K N Timmis.   

Abstract

Mineralization of organic molecules by microbes is essential for the carbon cycle to operate. The massive mobilization of compounds stored in natural resources, or the introduction of xenobiotics into the biosphere, leads to unidirectional fluxes, which result in the persistance of a number of chemicals in the biosphere, and thus constitute a source of pollution. Molecular biology offers the tools to optimize the biodegradative capacities of microorganisms, accelerate the evolution of "new" activities, and construct totally "new" pathways through the assemblage of catabolic segments from different microbes. Although the number of genetically engineered microbes (GEMs) for potential use in biodegradation is not large, these recombinant microbes function in microcosms according to their design. The survival and fate of recombinant microbes in different ecological niches under laboratory conditions is similar to what has been observed for the unmodified parental strains. rDNA, both on plasmids and on the host chromosome, is usually stably inherited by GEMs. The potential lateral transfer of rDNA from the GEMs to other microbes is significantly diminished, though not totally inhibited, when rDNA is incorporated on the host chromosome. The behavior and fate of GEMs can be predicted more accurately through the coupling of regulatory circuits that control the expression of catabolic pathways to killing genes, so that the GEMs survive in polluted environments, but die when the target chemical is eliminated.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 7765565      PMCID: PMC7097320          DOI: 10.1038/nbt1294-1349

Source DB:  PubMed          Journal:  Biotechnology (N Y)        ISSN: 0733-222X


  46 in total

1.  Localization of the site of cleavage of ribosomal RNA by colicin E3. Placement on the small ribosomal subunit by electron microscopy of antibody--complementary oligodeoxynucleotide complexes.

Authors:  L S Lasater; P A Cann; D G Glitz
Journal:  J Biol Chem       Date:  1989-12-25       Impact factor: 5.157

2.  Pseudomonas putida Strains Which Constitutively Overexpress Mercury Resistance for Biodetoxification of Organomercurial Pollutants.

Authors:  J M Horn; M Brunke; W D Deckwer; K N Timmis
Journal:  Appl Environ Microbiol       Date:  1994-01       Impact factor: 4.792

Review 3.  Suicidal genetic elements and their use in biological containment of bacteria.

Authors:  S Molin; L Boe; L B Jensen; C S Kristensen; M Givskov; J L Ramos; A K Bej
Journal:  Annu Rev Microbiol       Date:  1993       Impact factor: 15.500

4.  Biodegradation of 2,4-dinitrotoluene by a Pseudomonas sp.

Authors:  R J Spanggord; J C Spain; S F Nishino; K E Mortelmans
Journal:  Appl Environ Microbiol       Date:  1991-11       Impact factor: 4.792

5.  Construction of a Pseudomonas hybrid strain that mineralizes 2,4,6-trinitrotoluene.

Authors:  E Duque; A Haidour; F Godoy; J L Ramos
Journal:  J Bacteriol       Date:  1993-04       Impact factor: 3.490

6.  Chromosomal gene capture mediated by the Pseudomonas putida TOL catabolic plasmid.

Authors:  M I Ramos-González; M A Ramos-Díaz; J L Ramos
Journal:  J Bacteriol       Date:  1994-08       Impact factor: 3.490

Review 7.  Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways.

Authors:  S Marqués; J L Ramos
Journal:  Mol Microbiol       Date:  1993-09       Impact factor: 3.501

8.  Variation in the ability of Pseudomonas sp. strain B13 cultures to utilize meta-chlorobenzoate is associated with tandem amplification and deamplification of DNA.

Authors:  V M Rangnekar
Journal:  J Bacteriol       Date:  1988-04       Impact factor: 3.490

9.  Site-specific deletions of chromosomally located DNA segments with the multimer resolution system of broad-host-range plasmid RP4.

Authors:  C S Kristensen; L Eberl; J M Sanchez-Romero; M Givskov; S Molin; V De Lorenzo
Journal:  J Bacteriol       Date:  1995-01       Impact factor: 3.490

10.  Residues involved in the antigenic sites of transmissible gastroenteritis coronavirus S glycoprotein.

Authors:  F Gebauer; W P Posthumus; I Correa; C Suñé; C Smerdou; C M Sánchez; J A Lenstra; R H Meloen; L Enjuanes
Journal:  Virology       Date:  1991-07       Impact factor: 3.616

View more
  26 in total

1.  Crystallization and preliminary X-ray diffraction studies of the transcriptional repressor PaaX, the main regulator of the phenylacetic acid degradation pathway in Escherichia coli W.

Authors:  Alzoray Rojas-Altuve; César Carrasco-López; Víctor M Hernández-Rocamora; Jesús M Sanz; Juan A Hermoso
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-09-30

2.  Involvement of cyclopropane fatty acids in the response of Pseudomonas putida KT2440 to freeze-drying.

Authors:  Jesús Muñoz-Rojas; Patricia Bernal; Estrella Duque; Patricia Godoy; Ana Segura; Juan-Luis Ramos
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

3.  Synthetic biology: discovering new worlds and new words.

Authors:  Víctor de Lorenzo; Antoine Danchin
Journal:  EMBO Rep       Date:  2008-09       Impact factor: 8.807

4.  From biocontrol to cancer, probiotics and beyond.

Authors:  Colum Dunne
Journal:  Bioengineered       Date:  2012-12-17       Impact factor: 3.269

5.  General method of rapid Smith/Birnstiel mapping adds for gap closure in shotgun microbial genome sequencing projects: application to Pseudomonas putida KT2440.

Authors:  C Weinel; B Tümmler; H Hilbert; K E Nelson; C Kiewitz
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

Review 6.  Biotechnological domestication of pseudomonads using synthetic biology.

Authors:  Pablo I Nikel; Esteban Martínez-García; Víctor de Lorenzo
Journal:  Nat Rev Microbiol       Date:  2014-05       Impact factor: 60.633

7.  Construction of an efficient biologically contained pseudomonas putida strain and its survival in outdoor assays

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

8.  Combined physical and genetic map of the Pseudomonas putida KT2440 chromosome.

Authors:  M A Ramos-Díaz; J L Ramos
Journal:  J Bacteriol       Date:  1998-12       Impact factor: 3.490

9.  Selective enhancement of the fluorescent pseudomonad population after amending the recirculating nutrient solution of hydroponically grown plants with a nitrogen stabilizer.

Authors:  D Pagliaccia; D Merhaut; M C Colao; M Ruzzi; F Saccardo; M E Stanghellini
Journal:  Microb Ecol       Date:  2008-03-18       Impact factor: 4.552

Review 10.  Plant-associated bacterial degradation of toxic organic compounds in soil.

Authors:  Martina McGuinness; David Dowling
Journal:  Int J Environ Res Public Health       Date:  2009-08-12       Impact factor: 3.390

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.