Literature DB >> 22102047

Crystallization and preliminary X-ray diffraction studies of the transcriptional repressor PaaX, the main regulator of the phenylacetic acid degradation pathway in Escherichia coli W.

Alzoray Rojas-Altuve1, César Carrasco-López, Víctor M Hernández-Rocamora, Jesús M Sanz, Juan A Hermoso.   

Abstract

PaaX is the main regulator of the phenylacetic acid aerobic degradation pathway in bacteria and acts as a transcriptional repressor in the absence of its inducer phenylacetyl-coenzyme A. The natural presence and the recent accumulation of a variety of highly toxic aromatic compounds owing to human pollution has created considerable interest in the study of degradation pathways in bacteria, the most important microorganisms capable of recycling these compounds, in order to design and apply novel bioremediation strategies. PaaX from Escherichia coli W was cloned, overexpressed, purified and crystallized using the sitting-drop vapour-diffusion method at 291 K. Crystals grew from a mixture of 0.9 M Li(2)SO(4) and 0.5 M sodium citrate pH 5.8. These crystals, which belonged to the monoclinic space group C2 with unit-cell parameters a = 167.88, b = 106.23, c = 85.87 Å, β = 108.33°, allowed the collection of an X-ray data set to 2.3 Å resolution.
© 2011 International Union of Crystallography. All rights reserved.

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Year:  2011        PMID: 22102047      PMCID: PMC3212382          DOI: 10.1107/S1744309111029873

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  18 in total

1.  Phenylacetyl-coenzyme A is the true inducer of the phenylacetic acid catabolism pathway in Pseudomonas putida U.

Authors:  B García; E R Olivera; B Miñambres; D Carnicero; C Muñiz; G Naharro; J M Luengo
Journal:  Appl Environ Microbiol       Date:  2000-10       Impact factor: 4.792

Review 2.  Bacterial transcriptional regulators for degradation pathways of aromatic compounds.

Authors:  David Tropel; Jan Roelof van der Meer
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

3.  The PaaX repressor, a link between penicillin G acylase and the phenylacetyl-coenzyme A catabolon of Escherichia coli W.

Authors:  Beatriz Galán; José L García; María A Prieto
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Styrene lower catabolic pathway in Pseudomonas fluorescens ST: identification and characterization of genes for phenylacetic acid degradation.

Authors:  Patrizia Di Gennaro; Silvia Ferrara; Ilaria Ronco; Enrica Galli; Guido Sello; Maddalena Papacchini; Giuseppina Bestetti
Journal:  Arch Microbiol       Date:  2007-03-22       Impact factor: 2.552

6.  Coregulation by phenylacetyl-coenzyme A-responsive PaaX integrates control of the upper and lower pathways for catabolism of styrene by Pseudomonas sp. strain Y2.

Authors:  Teresa del Peso-Santos; David Bartolomé-Martín; Cristina Fernández; Sergio Alonso; José Luis García; Eduardo Díaz; Victoria Shingler; Julián Perera
Journal:  J Bacteriol       Date:  2006-07       Impact factor: 3.490

Review 7.  The phenylacetyl-CoA catabolon: a complex catabolic unit with broad biotechnological applications.

Authors:  J M Luengo; J L García; E R Olivera
Journal:  Mol Microbiol       Date:  2001-03       Impact factor: 3.501

8.  Transcriptional regulation of the divergent paa catabolic operons for phenylacetic acid degradation in Escherichia coli.

Authors:  A Ferrández; J L García; E Díaz
Journal:  J Biol Chem       Date:  2000-04-21       Impact factor: 5.157

9.  Molecular analysis of aerobic phenylacetate degradation in Azoarcus evansii.

Authors:  R Rost; S Haas; E Hammer; H Herrmann; G Burchhardt
Journal:  Mol Genet Genomics       Date:  2002-06-20       Impact factor: 3.291

10.  Regulation of penicillin G acylase gene expression in Escherichia coli by repressor PaaX and the cAMP-cAMP receptor protein complex.

Authors:  Hyoung Seok Kim; Tae Sun Kang; Joon Sik Hyun; Hyen Sam Kang
Journal:  J Biol Chem       Date:  2004-05-24       Impact factor: 5.157

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  1 in total

Review 1.  Structural Organization of Enzymes of the Phenylacetate Catabolic Hybrid Pathway.

Authors:  Andrey M Grishin; Miroslaw Cygler
Journal:  Biology (Basel)       Date:  2015-06-12
  1 in total

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