Literature DB >> 7753636

INO1-100: an allele of the Saccharomyces cerevisiae INO1 gene that is transcribed without the action of the positive factors encoded by the INO2, INO4, SWI1, SWI2 and SWI3 genes.

S Swift1, P McGraw.   

Abstract

A dominant allele of the INO1 locus, INO1-100, does not require the positive regulators encoded by INO2 and INO4 for expression. Sequence analysis showed that INO1-100 had a 239 bp deletion in the INO1 promoter. INO1-100 suppressed the inositol auxotrophy of ino2, ino4, swi1, swi2 and swi3 mutants. Transcription of INO1-100 was constitutive and independent of these regulators. A 20 bp deletion from -247 to -228 caused a similar phenotype. A 38 bp deletion from -245 to -208 suppressed the inositol auxotrophy of an ino2 mutant, but not an ino4 mutant, indicating that Ino2p and Ino4p may function alone as well as in a complex. A 40 bp deletion from -287 to -248 that removed a URS1 site caused constitutive transcription that required INO2 and INO4. A deletion from -167 to -128 suppressed the inositol auxotrophy of swi, ino2 and ino4 mutants, indicating the presence of a previously unidentified URS1. Mutation of the specific negative regulator of phospholipid synthesis encoded by OPI1 suppressed the inositol auxotrophy of swi2 mutants. This study indicates that negative regulation of INO1 is chromatin mediated and provides in vivo information on the interaction of both general and specific regulatory factors that function to accomplish negative and positive regulation of the INO1 promoter in response to inositol.

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Year:  1995        PMID: 7753636      PMCID: PMC306872          DOI: 10.1093/nar/23.8.1426

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  52 in total

1.  Analysis of sequences in the INO1 promoter that are involved in its regulation by phospholipid precursors.

Authors:  J M Lopes; J P Hirsch; P A Chorgo; K L Schulze; S A Henry
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

2.  A negative regulator of HO transcription, SIN1 (SPT2), is a nonspecific DNA-binding protein related to HMG1.

Authors:  W Kruger; I Herskowitz
Journal:  Mol Cell Biol       Date:  1991-08       Impact factor: 4.272

3.  The yeast UME6 gene product is required for transcriptional repression mediated by the CAR1 URS1 repressor binding site.

Authors:  H D Park; R M Luche; T G Cooper
Journal:  Nucleic Acids Res       Date:  1992-04-25       Impact factor: 16.971

4.  A cis-acting element present in multiple genes serves as a repressor protein binding site for the yeast CAR1 gene.

Authors:  R M Luche; R Sumrada; T G Cooper
Journal:  Mol Cell Biol       Date:  1990-08       Impact factor: 4.272

5.  Genetic applications of yeast transformation with linear and gapped plasmids.

Authors:  T L Orr-Weaver; J W Szostak; R J Rothstein
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

6.  A functional interaction between the C-terminal domain of RNA polymerase II and the negative regulator SIN1.

Authors:  C L Peterson; W Kruger; I Herskowitz
Journal:  Cell       Date:  1991-03-22       Impact factor: 41.582

7.  Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription.

Authors:  C L Peterson; I Herskowitz
Journal:  Cell       Date:  1992-02-07       Impact factor: 41.582

8.  Interaction of trans and cis regulatory elements in the INO1 promoter of Saccharomyces cerevisiae.

Authors:  J M Lopes; S A Henry
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

9.  RPD1 (SIN3/UME4) is required for maximal activation and repression of diverse yeast genes.

Authors:  M Vidal; R Strich; R E Esposito; R F Gaber
Journal:  Mol Cell Biol       Date:  1991-12       Impact factor: 4.272

10.  The OPI1 gene of Saccharomyces cerevisiae, a negative regulator of phospholipid biosynthesis, encodes a protein containing polyglutamine tracts and a leucine zipper.

Authors:  M J White; J P Hirsch; S A Henry
Journal:  J Biol Chem       Date:  1991-01-15       Impact factor: 5.157

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  8 in total

1.  Derepression of INO1 transcription requires cooperation between the Ino2p-Ino4p heterodimer and Cbf1p and recruitment of the ISW2 chromatin-remodeling complex.

Authors:  Ameet Shetty; John M Lopes
Journal:  Eukaryot Cell       Date:  2010-10-08

Review 2.  Genetic regulation of phospholipid biosynthesis in Saccharomyces cerevisiae.

Authors:  M L Greenberg; J M Lopes
Journal:  Microbiol Rev       Date:  1996-03

3.  Inositol transport in Saccharomyces cerevisiae is regulated by transcriptional and degradative endocytic mechanisms during the growth cycle that are distinct from inositol-induced regulation.

Authors:  K S Robinson; K Lai; T A Cannon; P McGraw
Journal:  Mol Biol Cell       Date:  1996-01       Impact factor: 4.138

Review 4.  SURVEY AND SUMMARY: Saccharomyces cerevisiae basic helix-loop-helix proteins regulate diverse biological processes.

Authors:  K A Robinson; J M Lopes
Journal:  Nucleic Acids Res       Date:  2000-04-01       Impact factor: 16.971

5.  A network of yeast basic helix-loop-helix interactions.

Authors:  K A Robinson; J I Koepke; M Kharodawala; J M Lopes
Journal:  Nucleic Acids Res       Date:  2000-11-15       Impact factor: 16.971

6.  Genomic analysis of the Opi- phenotype.

Authors:  Leandria C Hancock; Ryan P Behta; John M Lopes
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

7.  A novel mechanism for target gene-specific SWI/SNF recruitment via the Snf2p N-terminus.

Authors:  M Weider; A Schröder; F Klebl; N Sauer
Journal:  Nucleic Acids Res       Date:  2011-01-28       Impact factor: 16.971

8.  DNA zip codes control an ancient mechanism for gene targeting to the nuclear periphery.

Authors:  Sara Ahmed; Donna G Brickner; William H Light; Ivelisse Cajigas; Michele McDonough; Alexander B Froyshteter; Tom Volpe; Jason H Brickner
Journal:  Nat Cell Biol       Date:  2010-01-24       Impact factor: 28.824

  8 in total

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