Literature DB >> 7703360

Miscoding by the exocyclic and related DNA adducts 3,N4-etheno-2'-deoxycytidine, 3,N4-ethano-2'-deoxycytidine, and 3-(2-hydroxyethyl)-2'-deoxyuridine.

W Zhang1, F Johnson, A P Grollman, S Shibutani.   

Abstract

3,N4-Etheno-2'-deoxycytidine, 3-(hydroxyethyl)-2'-deoxyuridine, and 3,N4-ethano-2'-deoxy-cytidine are found in DNA of cells treated with either vinyl chloride or 1,3-bis(2-chloroethyl)-nitrosourea. These exocyclic and related DNA adducts were incorporated into oligodeoxynucleotides, which were then used as templates for primer extension in reactions catalyzed by the Klenow fragment of Escherichia coli DNA polymerase I. The miscoding potential of each lesion was determined quantitatively. DNA primers were readily extended on an epsilon dC-modified template; dAMP and dTMP were incorporated opposite the lesion. With high concentrations of DNA polymerase, small amounts of fully extended reaction products containing dAMP and dGMP or one-base and two-base deletions opposite ethano-dC were formed. Primer extension was blocked partially on templates containing 3-(hydroxyethyl)-dU; dAMP and smaller amounts of dTMP and dCMP were incorporated. The frequencies of nucleotide insertion opposite each of the three lesions and the frequencies of chain extension from the 3'-primer terminus, determined by kinetic analysis, were consistent with results of experiments utilizing polyacrylamide gel electrophoresis. We conclude from these studies that epsilon dC, ethano-dC, and 3-(hydroxyethyl)-U are potentially miscoding lesions; only epsilon dC facilitates translesional synthesis.

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Year:  1995        PMID: 7703360     DOI: 10.1021/tx00043a021

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  11 in total

1.  Integrity of duplex structures without hydrogen bonding: DNA with pyrene paired at abasic sites.

Authors:  Serge Smirnov; Tracy J Matray; Eric T Kool; Carlos de los Santos
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

2.  Formation of fused-ring 2'-deoxycytidine adducts from 1-chloro-3-buten-2-one, an in vitro 1,3-butadiene metabolite, under in vitro physiological conditions.

Authors:  Liang Sun; Avishay Pelah; Dong-Ping Zhang; Yu-Fang Zhong; Jing An; Ying-Xin Yu; Xin-Yu Zhang; Adnan A Elfarra
Journal:  Chem Res Toxicol       Date:  2013-09-25       Impact factor: 3.739

Review 3.  Biological properties of single chemical-DNA adducts: a twenty year perspective.

Authors:  James C Delaney; John M Essigmann
Journal:  Chem Res Toxicol       Date:  2007-12-12       Impact factor: 3.739

Review 4.  Chemistry and structural biology of DNA damage and biological consequences.

Authors:  Michael P Stone; Hai Huang; Kyle L Brown; Ganesh Shanmugam
Journal:  Chem Biodivers       Date:  2011-09       Impact factor: 2.408

Review 5.  Endogenous versus exogenous DNA adducts: their role in carcinogenesis, epidemiology, and risk assessment.

Authors:  James A Swenberg; Kun Lu; Benjamin C Moeller; Lina Gao; Patricia B Upton; Jun Nakamura; Thomas B Starr
Journal:  Toxicol Sci       Date:  2010-12-16       Impact factor: 4.849

6.  Replication of N2,3-ethenoguanine by DNA polymerases.

Authors:  Linlin Zhao; Plamen P Christov; Ivan D Kozekov; Matthew G Pence; Pradeep S Pallan; Carmelo J Rizzo; Martin Egli; F Peter Guengerich
Journal:  Angew Chem Int Ed Engl       Date:  2012-04-04       Impact factor: 15.336

7.  Synthesis and mutagenesis of the butadiene-derived N3 2'-deoxyuridine adducts.

Authors:  Priscilla H Fernandes; Linda C Hackfeld; Ivan D Kozekov; Richard P Hodge; R Stephen Lloyd
Journal:  Chem Res Toxicol       Date:  2006-07       Impact factor: 3.739

8.  In vivo detection of a novel endogenous etheno-DNA adduct derived from arachidonic acid and the effects of antioxidants on its formation.

Authors:  Ying Fu; Raghu G Nath; Marcin Dyba; Idalia M Cruz; Sharanya R Pondicherry; Aileen Fernandez; Casey L Schultz; Peiying Yang; Jishen Pan; Dhimant Desai; Jacek Krzeminski; Shantu Amin; Plamen P Christov; Yukihiko Hara; Fung-Lung Chung
Journal:  Free Radic Biol Med       Date:  2014-05-06       Impact factor: 7.376

9.  Mechanism of 1,N2-etheno-2'-deoxyguanosine formation from epoxyaldehydes.

Authors:  Katya V Petrova; Ravikumar S Jalluri; Ivan D Kozekov; Carmelo J Rizzo
Journal:  Chem Res Toxicol       Date:  2007-10-02       Impact factor: 3.739

10.  A 55-kDa protein isolated from human cells shows DNA glycosylase activity toward 3,N4-ethenocytosine and the G/T mismatch.

Authors:  B Hang; M Medina; H Fraenkel-Conrat; B Singer
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

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