Literature DB >> 7692399

RNA binding properties and evolutionary conservation of the Xenopus multifinger protein Xfin.

M Andreazzoli1, S De Lucchini, M Costa, G Barsacchi.   

Abstract

Xfin is a Xenopus zinc finger protein which is expressed in the cytoplasm of the oocyte and throughout embryogenesis, as well as in the cytoplasm of some specific and highly differentiated cell types (De Lucchini et al., Mech. Dev. 36, 31-40, 1991). In this paper we present a characterization of some structural features of the protein and of its nucleic acid binding properties. We found that Xfin is a phosphoprotein, is present in the soluble fraction of the cytoplasm, and is actively phosphorylated in cytosolic extracts. Several putative phosphorylation sites are present in the cDNA-derived protein sequence, mostly located at specific positions within the Zn-fingers. In an in vitro assay a fusion protein containing part of the finger region of Xfin exhibits specific binding to a poly (G) RNA homopolymer, while it does not bind DNA. The RNA binding activity of the protein is significantly enhanced by phosphorylation. A putative Xfin homolog, which appears to be evolutionarily conserved with regard to size, cytoplasmic expression and antigenic specificity, is present in representatives of five Vertebrate classes. Taken together, these results may suggest that, by virtue of its RNA binding activity modulated through phosphorylation, Xfin could serve some evolutionarily conserved function in post-transcriptional regulation processes.

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Year:  1993        PMID: 7692399      PMCID: PMC310053          DOI: 10.1093/nar/21.18.4218

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  40 in total

1.  Members of the zinc finger protein gene family sharing a conserved N-terminal module.

Authors:  M Rosati; M Marino; A Franzè; A Tramontano; G Grimaldi
Journal:  Nucleic Acids Res       Date:  1991-10-25       Impact factor: 16.971

2.  Drosophila Krüppel gene product produced in a baculovirus expression system is a nuclear phosphoprotein that binds to DNA.

Authors:  R Ollo; T Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  1987-08       Impact factor: 11.205

3.  Association of a 5S gene transcription factor with 5S RNA and altered levels of the factor during cell differentiation.

Authors:  B M Honda; R G Roeder
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

4.  Isolation of a 7S particle from Xenopus laevis oocytes: a 5S RNA-protein complex.

Authors:  B Picard; M Wegnez
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

5.  Malignant transformation of early passage rodent cells by a single mutated human oncogene.

Authors:  D A Spandidos; N M Wilkie
Journal:  Nature       Date:  1984 Aug 9-15       Impact factor: 49.962

6.  A specific transcription factor that can bind either the 5S RNA gene or 5S RNA.

Authors:  H R Pelham; D D Brown
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

7.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

8.  A gene encoding a protein with zinc fingers is activated during G0/G1 transition in cultured cells.

Authors:  P Chavrier; M Zerial; P Lemaire; J Almendral; R Bravo; P Charnay
Journal:  EMBO J       Date:  1988-01       Impact factor: 11.598

9.  Xfin: an embryonic gene encoding a multifingered protein in Xenopus.

Authors:  A Ruiz i Altaba; H Perry-O'Keefe; D A Melton
Journal:  EMBO J       Date:  1987-10       Impact factor: 11.598

10.  Characterization of a transcription factor involved in mother cell specific transcription of the yeast HO gene.

Authors:  D J Stillman; A T Bankier; A Seddon; E G Groenhout; K A Nasmyth
Journal:  EMBO J       Date:  1988-02       Impact factor: 11.598

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  6 in total

1.  A novel zinc finger protein is associated with U7 snRNP and interacts with the stem-loop binding protein in the histone pre-mRNP to stimulate 3'-end processing.

Authors:  Zbigniew Dominski; Judith A Erkmann; Xiaocui Yang; Ricardo Sànchez; William F Marzluff
Journal:  Genes Dev       Date:  2002-01-01       Impact factor: 11.361

2.  The role of zinc finger linkers in p43 and TFIIIA binding to 5S rRNA and DNA.

Authors:  R F Ryan; M K Darby
Journal:  Nucleic Acids Res       Date:  1998-02-01       Impact factor: 16.971

3.  Human and mouse MOK2 proteins are associated with nuclear ribonucleoprotein components and bind specifically to RNA and DNA through their zinc finger domains.

Authors:  V Arranz; F Harper; Y Florentin; E Puvion; M Kress; M Ernoult-Lange
Journal:  Mol Cell Biol       Date:  1997-04       Impact factor: 4.272

Review 4.  Genetic control of development in Xenopus laevis.

Authors:  R Vignali; S De Lucchini; B Kablar; G Barsacchi
Journal:  Genetica       Date:  1994       Impact factor: 1.082

5.  The zinc fingers of YY1 bind single-stranded RNA with low sequence specificity.

Authors:  Dorothy C C Wai; Manar Shihab; Jason K K Low; Joel P Mackay
Journal:  Nucleic Acids Res       Date:  2016-07-01       Impact factor: 16.971

6.  The B-subdomain of the Xenopus laevis XFIN KRAB-AB domain is responsible for its weaker transcriptional repressor activity compared to human ZNF10/Kox1.

Authors:  Nadine Born; Hans-Jürgen Thiesen; Peter Lorenz
Journal:  PLoS One       Date:  2014-02-03       Impact factor: 3.240

  6 in total

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