Literature DB >> 7685277

Functional tRNAs with altered 3' ends.

M O'Connor1, N M Willis, L Bossi, R F Gesteland, J F Atkins.   

Abstract

The CCA trinucleotide is a universally conserved feature of the 3' end of tRNAs, where it serves as the site of amino acid attachment. Despite this extreme conservation, we have isolated functional mutants of tRNA(His) and tRNA(Val1) with altered CCA ends. A mutant that leads to de-repression of the histidine biosynthetic operon in Salmonella typhimurium has been characterized and found to have the CCA end of the sole tRNA(His) species mutated to UCA. However, constructed mutants of tRNA(His) with ACA or GCA ends appeared to be nonfunctional in vivo. Mutants of Escherichia coli tRNA(Val1) with GCA or ACA ends were isolated on the basis of their ability to promote frameshifting at a specific sequence. These same tRNA(Val1) mutants also caused read-through of stop codons that were one, or in some instances two, codons downstream of the valine codon decoded by the mutant tRNA. A startling implication of these data is that disruption of interactions between the CCA end of the tRNA and the large ribosomal subunit promotes these aberrant codon-anticodon interactions on the small ribosomal subunit.

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Year:  1993        PMID: 7685277      PMCID: PMC413494          DOI: 10.1002/j.1460-2075.1993.tb05911.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  55 in total

1.  Influence of codon context on UGA suppression and readthrough.

Authors:  J Kopelowitz; C Hampe; R Goldman; M Reches; H Engelberg-Kulka
Journal:  J Mol Biol       Date:  1992-05-20       Impact factor: 5.469

2.  Acetylornithinase of Escherichia coli: partial purification and some properties.

Authors:  H J VOGEL; D M BONNER
Journal:  J Biol Chem       Date:  1956-01       Impact factor: 5.157

3.  Proteins encoded by the Escherichia coli replication terminus region.

Authors:  P D Moir; R Spiegelberg; I R Oliver; J H Pringle; M Masters
Journal:  J Bacteriol       Date:  1992-04       Impact factor: 3.490

4.  Histidine regulation in Salmonella typhimurium. IX. Histidine transfer ribonucleic acid of the regulatory mutants.

Authors:  M Brenner; B N Ames
Journal:  J Biol Chem       Date:  1972-02-25       Impact factor: 5.157

5.  Translation of the UGA triplet in vitro by tryptophan transfer RNA's.

Authors:  D Hirsh; L Gold
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

6.  Ribosome-catalyzed peptidyl transfer: substrate specificity at the P-site.

Authors:  R E Monro; J Cerná; K A Marcker
Journal:  Proc Natl Acad Sci U S A       Date:  1968-11       Impact factor: 11.205

7.  Histidine regulatory mutants in Salmonella typhimurium. I. Isolation and general properties.

Authors:  J R Roth; D N Antón; P E Hartman
Journal:  J Mol Biol       Date:  1966-12-28       Impact factor: 5.469

8.  A further study of misreading of codons induced by streptomycin and neomycin using ribopolynucleotides containing two nucleotides in alternating sequence as templates.

Authors:  J Davies; D S Jones; H G Khorana
Journal:  J Mol Biol       Date:  1966-06       Impact factor: 5.469

9.  Ribosome-catalysed reaction of puromycin with a formylmethionine-containing oligonucleotide.

Authors:  R E Monro; K A Marcker
Journal:  J Mol Biol       Date:  1967-04-28       Impact factor: 5.469

10.  The nucleotide sequence of the first externally suppressible--1 frameshift mutant, and of some nearby leaky frameshift mutants.

Authors:  J F Atkins; B P Nichols; S Thompson
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  25 in total

1.  Solution structure of the A loop of 23S ribosomal RNA.

Authors:  S C Blanchard; J D Puglisi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-20       Impact factor: 11.205

2.  Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.

Authors:  Michael O'Connor
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

3.  Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation.

Authors:  Anthony R Cukras; Rachel Green
Journal:  J Mol Biol       Date:  2005-04-12       Impact factor: 5.469

4.  The growth defect in Escherichia coli deficient in peptidyl-tRNA hydrolase is due to starvation for Lys-tRNA(Lys).

Authors:  V Heurgué-Hamard; L Mora; G Guarneros; R H Buckingham
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

5.  A case for "StopGo": reprogramming translation to augment codon meaning of GGN by promoting unconventional termination (Stop) after addition of glycine and then allowing continued translation (Go).

Authors:  John F Atkins; Norma M Wills; Gary Loughran; Chih-Yu Wu; Krishna Parsawar; Martin D Ryan; Chung-Hsiung Wang; Chad C Nelson
Journal:  RNA       Date:  2007-04-24       Impact factor: 4.942

6.  Genetic analysis of the E site during RF2 programmed frameshifting.

Authors:  Christina L Sanders; James F Curran
Journal:  RNA       Date:  2007-07-27       Impact factor: 4.942

Review 7.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 8.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

9.  Are the current three-site models valid descriptions of the ribosomal elongation cycle?

Authors:  K H Nierhaus; R Jünemann; C M Spahn
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-30       Impact factor: 11.205

10.  Decoding fidelity at the ribosomal A and P sites: influence of mutations in three different regions of the decoding domain in 16S rRNA.

Authors:  M O'Connor; C L Thomas; R A Zimmermann; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1997-03-15       Impact factor: 16.971

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