Literature DB >> 7675034

In vitro control analysis of an enzyme system: experimental and analytical developments.

H M Sauro1, J Barrett.   

Abstract

In this paper we describe a flow-through system for reconstituting parts of metabolism from purified enzymes. This involves pumping continuously into a reaction chamber, fresh enzymes and reagents so that metabolic reactions occur in the chamber. The waste products leave the chamber via the outflow so that a steady state can be setup. The system we chose consisted of a single enzyme, lactate dehydrogenase. This enzyme was chosen because it consumes NADH in the chamber which could be monitored spectrophotometrically. The aim of the work was to investigate whether a steady state could be achieved in the flow system and whether a metabolic control analysis could be done. We measured two control coefficients, CLDH and Cpump for the enzyme flux and NADH concentration and confirmed that the summation theorem applied to this system. The advantage of a flow-through system is that the titrations necessary to estimate the control coefficients can be easily and precisely controlled; this means that accurate estimates for the control coefficients can be obtained. In the paper, we discuss some statistical aspects of the data analysis and some possible applications of the technique, including a method to determine the presence of metabolic channelling between two different enzymes.

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Year:  1995        PMID: 7675034     DOI: 10.1007/bf00935486

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  16 in total

1.  Control of the metabolic flux in a system with high enzyme concentrations and moiety-conserved cycles. The sum of the flux control coefficients can drop significantly below unity.

Authors:  B N Kholodenko; A E Lyubarev; B I Kurganov
Journal:  Eur J Biochem       Date:  1992-11-15

2.  Metabolic control analysis. The effects of high enzyme concentrations.

Authors:  D A Fell; H M Sauro
Journal:  Eur J Biochem       Date:  1990-08-28

Review 3.  Enzyme-enzyme interactions and control analysis. 2. The case of non-independence: heterologous associations.

Authors:  H M Sauro; H Kacser
Journal:  Eur J Biochem       Date:  1990-02-14

Review 4.  Enzyme-enzyme interactions and control analysis. 1. The case of non-additivity: monomer-oligomer associations.

Authors:  H Kacser; H M Sauro; L Acerenza
Journal:  Eur J Biochem       Date:  1990-02-14

5.  Resolvability of free energy changes for oxygen binding and subunit association by human hemoglobin.

Authors:  M Straume; M L Johnson
Journal:  Biophys J       Date:  1989-07       Impact factor: 4.033

6.  Responses of metabolic systems to large changes in enzyme activities and effectors. 1. The linear treatment of unbranched chains.

Authors:  J R Small; H Kacser
Journal:  Eur J Biochem       Date:  1993-04-01

7.  Dramatic changes in control properties that accompany channelling and metabolite sequestration.

Authors:  B N Kholodenko; M Cascante; H V Westerhoff
Journal:  FEBS Lett       Date:  1993-12-28       Impact factor: 4.124

8.  Moiety-conserved cycles and metabolic control analysis: problems in sequestration and metabolic channelling.

Authors:  H M Sauro
Journal:  Biosystems       Date:  1994       Impact factor: 1.973

9.  Evaluation and propagation of confidence intervals in nonlinear, asymmetrical variance spaces. Analysis of ligand-binding data.

Authors:  M L Johnson
Journal:  Biophys J       Date:  1983-10       Impact factor: 4.033

10.  The control of flux.

Authors:  H Kacser; J A Burns
Journal:  Symp Soc Exp Biol       Date:  1973
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