Literature DB >> 7669899

Thermal fluctuations between conformational substates of the Fe(2+)-HisF8 linkage in deoxymyoglobin probed by the Raman active Fe-N epsilon (HisF8) stretching vibration.

H Gilch1, W Dreybrodt, R Schweitzer-Stenner.   

Abstract

We have measured the VFe-His Raman band of horse heart deoxymyoglobin dissolved in an aqueous solution as a function of temperature between 10 and 300 K. The minimal model to which these data can be fitted in a statistically significant and physically meaningful way comprises four different Lorentzian bands with frequencies at 197, 209, 218, and 226 cm-1, and a Gaussian band at 240 cm-1, which exhibit halfwidths between 10 and 12.5 cm-1. All these parameters were assumed to be independent of temperature. The temperature dependence of the apparent total band shape's frequency is attributed to an intensity redistribution of the subbands at omega 1 = 209 cm-1, omega 2 = 218 cm-1, and omega 3 = 226 cm-1, which are assigned to Fe-N epsilon (HisF8) stretching modes in different conformational substrates of the Fe-HisF8 linkage. They comprise different out-of-plane displacements of the heme iron. The two remaining bands at 197 and 240 cm-1 result from porphyrin modes. Their intensity ratio is nearly temperature independent. The intensity ratio I3/I2 of the vFe-His subbands exhibits a van't Hoff behavior between 150 and 300 K, bending over in a region between 150 and 80 K, and remains constant between 80 and 10 K, whereas I2/I1 shows a maximum at 170 K and approaches a constant value at 80 K. These data can be fitted by a modified van't Hoff expression, which accounts for the freezing into a non-equilibrium distribution of substates below a distinct temperature Tf and also for the linear temperature dependence of the specific heat of proteins. The latter leads to a temperature dependence of the entropic and enthalpic differences between conformational substates. The fits to the intensity ratios of the vFe-His subbands yield a freezing temperature of Tf = 117 K and a transition region of delta T = 55 K. In comparison we have utilized the above thermodynamic model to reanalyze earlier data on the temperature dependence of the ratio Ao/A1 of two subbands underlying the infrared absorption band of the CO stretching vibration in CO-ligated myoglobin (A. Ansari, J. Berendzen, D. Braunstein, B. R. Cowen, H. Frauenfelder, M. K. Kong, I. E. T. Iben, J. Johnson, P. Ormos, T. B. Sauke, R. Scholl, A. Schulte, P. J. Steinbach, R. D. Vittitow, and R. D. Young, 1987, Biophys. Chem. 26:237-335). This yields thermodynamic parameters, in particular the freezing temperature (Tf = 231 K) and the width of the transition region (AT =8 K), which are significantly different from the corresponding parameters obtained from the above vFe-His data, but very close to values describing the transition of protein bound water from a liquid into an amorphous state. These findings and earlier reported data on the temperature dependence exhibited by the Soret absorption bands of various deoxy and carbonmonoxymyoglobins led us to the conclusion that the fluctuations between conformational substates of the heme environment in carbonmonoxymyoglobin are strongly coupled to motions within the hydration shell, whereas the thermal motions between the substates of the Fe-HisF8 linkage in deoxymyoglobin proceed on an energy landscape that is mainly determined by the intrinsic properties of the protein. The latter differ from protein fluctuations monitored by Mossbauer experiments ondeoxymyoglobin crystals which exhibit a strong coupling to the protein bound water and most probably reflect a higher tier in the hierarchical arrangement of substates and equilibrium fluctuations.

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Year:  1995        PMID: 7669899      PMCID: PMC1236239          DOI: 10.1016/S0006-3495(95)79893-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  51 in total

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Journal:  Phys Rev Lett       Date:  1986-09-08       Impact factor: 9.161

2.  Ligand binding to heme proteins: connection between dynamics and function.

Authors:  P J Steinbach; A Ansari; J Berendzen; D Braunstein; K Chu; B R Cowen; D Ehrenstein; H Frauenfelder; J B Johnson; D C Lamb
Journal:  Biochemistry       Date:  1991-04-23       Impact factor: 3.162

3.  A model of protein conformational substates.

Authors:  D L Stein
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

4.  Orientation of carbon monoxide and structure-function relationship in carbonmonoxymyoglobin.

Authors:  P Ormos; D Braunstein; H Frauenfelder; M K Hong; S L Lin; T B Sauke; R D Young
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

5.  Response of the local heme environment of (carbonmonoxy)hemoglobin to protein dehydration.

Authors:  E W Findsen; P Simons; M R Ondrias
Journal:  Biochemistry       Date:  1986-12-02       Impact factor: 3.162

6.  Kinetic, structural, and spectroscopic identification of geminate states of myoglobin: a ligand binding site on the reaction pathway.

Authors:  L Powers; B Chance; M Chance; B Campbell; J Friedman; S Khalid; C Kumar; A Naqui; K S Reddy; Y Zhou
Journal:  Biochemistry       Date:  1987-07-28       Impact factor: 3.162

7.  Structural relaxation and nonexponential kinetics of CO-binding to horse myoglobin. Multiple flash photolysis experiments.

Authors:  F Post; W Doster; G Karvounis; M Settles
Journal:  Biophys J       Date:  1993-06       Impact factor: 4.033

8.  Protein dynamics. Mössbauer spectroscopy on deoxymyoglobin crystals.

Authors:  F Parak; E W Knapp; D Kucheida
Journal:  J Mol Biol       Date:  1982-10-15       Impact factor: 5.469

9.  Alkali cation effect on carbonyl-hemoglobin's and -myoglobin's conformer populations when exposed to freeze-concentration of their phosphate-buffered aqueous solutions.

Authors:  G Astl; E Mayer
Journal:  Biochim Biophys Acta       Date:  1991-10-25

10.  Structural heterogeneity of the Fe(2+)-N epsilon (HisF8) bond in various hemoglobin and myoglobin derivatives probed by the Raman-active iron histidine stretching mode.

Authors:  H Gilch; R Schweitzer-Stenner; W Dreybrodt
Journal:  Biophys J       Date:  1993-10       Impact factor: 4.033

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  6 in total

1.  Temperature dependence of the iron-histidine resonance Raman band of deoxyheme proteins: anharmonic coupling versus distribution over taxonomic conformational substates.

Authors:  Michael Korostishevsky; Zeev Zaslavsky; Solomon S Stavrov
Journal:  Biophys J       Date:  2004-01       Impact factor: 4.033

2.  Pressure effects on the proximal heme pocket in myoglobin probed by Raman and near-infrared absorption spectroscopy.

Authors:  O Galkin; S Buchter; A Tabirian; A Schulte
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

3.  Structural fluctuations of myoglobin from normal-modes, Mössbauer, Raman, and absorption spectroscopy.

Authors:  B Melchers; E W Knapp; F Parak; L Cordone; A Cupane; M Leone
Journal:  Biophys J       Date:  1996-05       Impact factor: 4.033

4.  Iron-histidine resonance Raman band of deoxyheme proteins: effects of anharmonic coupling and glass-liquid phase transition.

Authors:  A Bitler; S S Stavrov
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

5.  Nuclear resonance vibrational spectra of five-coordinate imidazole-ligated iron(II) porphyrinates.

Authors:  Chuanjiang Hu; Alexander Barabanschikov; Mary K Ellison; Jiyong Zhao; E Ercan Alp; Wolfgang Sturhahn; Marek Z Zgierski; J Timothy Sage; W Robert Scheidt
Journal:  Inorg Chem       Date:  2012-01-13       Impact factor: 5.165

6.  The Fe(2+)-His(F8) Raman band shape of deoxymyoglobin reveals taxonomic conformational substates of the proximal linkage.

Authors:  J Schott; W Dreybrodt; R Schweitzer-Stenner
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

  6 in total

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