Literature DB >> 7666519

Efficient excision of the upstream large intron from P4-generated pre-mRNA of the parvovirus minute virus of mice requires at least one donor and the 3' splice site of the small downstream intron.

Q Zhao1, A Gersappe, D J Pintel.   

Abstract

We have previously shown that efficient excision of the upstream large intron from P4-generated pre-mRNA of the autonomous parvovirus minute virus of mice depends upon at least the initial presence of sequences within the downstream small intron (Q. Zhao, R. V. Schoborg, and D. J. Pintel, J. Virol. 68:2849-2859, 1994). In this report, we show that the requirement of downstream small intron sequences is complex and that efficient excision of the upstream intron requires at least one small intron donor and the 3' splice site. In the absence of both small intron donors, a new spliced product is produced in which the intervening exon is skipped and the large intron donor at nucleotide 514 is joined to a small intron acceptor. Exon skipping caused by the loss of the two small intron donors can be overcome, and the excision of the large intron can be regained by mutations that improve the large intron polypyrimidine tract. These results are consistent with a model in which the binding of multiple splicing factors that assemble at both a downstream donor and acceptor facilitates the binding of splicing factors to the weak polypyrimidine tract of the upstream large intron, thereby defining the intervening exon and promoting excision of the upstream intron.

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Year:  1995        PMID: 7666519      PMCID: PMC189514     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  36 in total

1.  A role for exon sequences and splice-site proximity in splice-site selection.

Authors:  R Reed; T Maniatis
Journal:  Cell       Date:  1986-08-29       Impact factor: 41.582

2.  Exon definition may facilitate splice site selection in RNAs with multiple exons.

Authors:  B L Robberson; G J Cote; S M Berget
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

3.  The two transcription units of the autonomous parvovirus minute virus of mice are transcribed in a temporal order.

Authors:  K E Clemens; D J Pintel
Journal:  J Virol       Date:  1988-04       Impact factor: 5.103

4.  Effects of RNA secondary structure on alternative splicing of pre-mRNA: is folding limited to a region behind the transcribing RNA polymerase?

Authors:  L P Eperon; I R Graham; A D Griffiths; I C Eperon
Journal:  Cell       Date:  1988-07-29       Impact factor: 41.582

Review 5.  Alternative splicing in the control of gene expression.

Authors:  C W Smith; J G Patton; B Nadal-Ginard
Journal:  Annu Rev Genet       Date:  1989       Impact factor: 16.830

Review 6.  The autonomously replicating parvoviruses of vertebrates.

Authors:  S F Cotmore; P Tattersall
Journal:  Adv Virus Res       Date:  1987       Impact factor: 9.937

Review 7.  Splicing of messenger RNA precursors.

Authors:  R A Padgett; P J Grabowski; M M Konarska; S Seiler; P A Sharp
Journal:  Annu Rev Biochem       Date:  1986       Impact factor: 23.643

8.  RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression.

Authors:  M B Shapiro; P Senapathy
Journal:  Nucleic Acids Res       Date:  1987-09-11       Impact factor: 16.971

9.  The genome of minute virus of mice, an autonomous parvovirus, encodes two overlapping transcription units.

Authors:  D Pintel; D Dadachanji; C R Astell; D C Ward
Journal:  Nucleic Acids Res       Date:  1983-02-25       Impact factor: 16.971

10.  Minute virus of mice (MVM) mRNAs predominantly polyadenylate at a single site.

Authors:  K E Clemens; D Pintel
Journal:  Virology       Date:  1987-10       Impact factor: 3.616

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  8 in total

1.  A premature termination codon interferes with the nuclear function of an exon splicing enhancer in an open reading frame-dependent manner.

Authors:  A Gersappe; D J Pintel
Journal:  Mol Cell Biol       Date:  1999-03       Impact factor: 4.272

2.  Splicing of the large intron present in the nonstructural gene of minute virus of mice is governed by TIA-1/TIAR binding downstream of the nonconsensus donor.

Authors:  Eun-Young Choi; David Pintel
Journal:  J Virol       Date:  2009-04-01       Impact factor: 5.103

3.  Intron retention may regulate expression of Epstein-Barr virus nuclear antigen 3 family genes.

Authors:  N Kienzle; D B Young; D Liaskou; M Buck; S Greco; T B Sculley
Journal:  J Virol       Date:  1999-02       Impact factor: 5.103

4.  Intron definition is required for excision of the minute virus of mice small intron and definition of the upstream exon.

Authors:  D D Haut; D J Pintel
Journal:  J Virol       Date:  1998-03       Impact factor: 5.103

5.  Replication of minute virus of mice DNA is critically dependent on accumulated levels of NS2.

Authors:  Eun-Young Choi; Ann E Newman; Lisa Burger; David Pintel
Journal:  J Virol       Date:  2005-10       Impact factor: 5.103

6.  Selection of the bovine papillomavirus type 1 nucleotide 3225 3' splice site is regulated through an exonic splicing enhancer and its juxtaposed exonic splicing suppressor.

Authors:  Z M Zheng; P He; C C Baker
Journal:  J Virol       Date:  1996-07       Impact factor: 5.103

7.  CA- and purine-rich elements form a novel bipartite exon enhancer which governs inclusion of the minute virus of mice NS2-specific exon in both singly and doubly spliced mRNAs.

Authors:  A Gersappe; D J Pintel
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

8.  Binding of CCCTC-Binding Factor (CTCF) to the Minute Virus of Mice Genome Is Important for Proper Processing of Viral P4-Generated Pre-mRNAs.

Authors:  Maria Boftsi; Kinjal Majumder; Lisa R Burger; David J Pintel
Journal:  Viruses       Date:  2020-11-30       Impact factor: 5.048

  8 in total

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