Literature DB >> 7656016

Correlated intramolecular motions and diffuse X-ray scattering in lysozyme.

P Faure1, A Micu, D Pérahia, J Doucet, J C Smith, J P Benoit.   

Abstract

Correlated motions of protein atoms are of biological significance in processes involving ligand binding, conformational change and information transmission. X-ray scattering patterns from protein crystals contain diffuse scattering that originates from correlated displacements of atoms. Here we present experimental data on diffuse X-ray scattering from lysozyme crystals. We show that the diffuse scattering is similar in form to scattering derived from molecular dynamics simulation and normal mode analysis of the isolated protein, the normal modes giving the closest agreement with experiment.

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Year:  1994        PMID: 7656016     DOI: 10.1038/nsb0294-124

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  23 in total

1.  Functional domain motions in proteins on the ~1-100 ns timescale: comparison of neutron spin-echo spectroscopy of phosphoglycerate kinase with molecular-dynamics simulation.

Authors:  N Smolin; R Biehl; G R Kneller; D Richter; J C Smith
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Evaluating elastic network models of crystalline biological molecules with temperature factors, correlated motions, and diffuse x-ray scattering.

Authors:  Demian Riccardi; Qiang Cui; George N Phillips
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

3.  Acoustic vibrations contribute to the diffuse scatter produced by ribosome crystals.

Authors:  Yury S Polikanov; Peter B Moore
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-09-26

4.  Fluctuations and correlations in crystalline protein dynamics: a simulation analysis of staphylococcal nuclease.

Authors:  Lars Meinhold; Jeremy C Smith
Journal:  Biophys J       Date:  2005-01-28       Impact factor: 4.033

5.  Heterogeneity of packing: structural approach.

Authors:  N Kurochkina; G Privalov
Journal:  Protein Sci       Date:  1998-04       Impact factor: 6.725

6.  Three-dimensional diffuse x-ray scattering from crystals of Staphylococcal nuclease.

Authors:  M E Wall; S E Ealick; S M Gruner
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

7.  Conformational dynamics of a crystalline protein from microsecond-scale molecular dynamics simulations and diffuse X-ray scattering.

Authors:  Michael E Wall; Andrew H Van Benschoten; Nicholas K Sauter; Paul D Adams; James S Fraser; Thomas C Terwilliger
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-01       Impact factor: 11.205

Review 8.  X-ray Scattering Studies of Protein Structural Dynamics.

Authors:  Steve P Meisburger; William C Thomas; Maxwell B Watkins; Nozomi Ando
Journal:  Chem Rev       Date:  2017-05-30       Impact factor: 60.622

9.  Diffuse X-ray scattering to model protein motions.

Authors:  Michael E Wall; Paul D Adams; James S Fraser; Nicholas K Sauter
Journal:  Structure       Date:  2014-02-04       Impact factor: 5.006

10.  Measuring and modeling diffuse scattering in protein X-ray crystallography.

Authors:  Andrew H Van Benschoten; Lin Liu; Ana Gonzalez; Aaron S Brewster; Nicholas K Sauter; James S Fraser; Michael E Wall
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-28       Impact factor: 11.205

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