Literature DB >> 7638235

Photocleavable biotin derivatives: a versatile approach for the isolation of biomolecules.

J Olejnik1, S Sonar, E Krzymañska-Olejnik, K J Rothschild.   

Abstract

While the strong biotin-avidin interaction has been widely used for the detection of biomolecules, its irreversibility complicates their isolation. We report the synthesis of a photocleavable biotin derivative (PCB) which eliminates many limitations of existing methods. This reagent contains a biotin moiety linked through a spacer arm to a photocleavable moiety, which reacts selectively with primary amino groups on any substrate. In experiments using [leucine]-enkephalin as a model substrate, we show that PCB retains its high affinity toward avidin/streptavidin and allows rapid (< 5 min) and efficient (> 99%) photorelease of the substrate in a completely unaltered form. Photocleavable biotins should be useful in numerous applications involving the isolation of proteins, nucleic acids, lipids, and cells.

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Year:  1995        PMID: 7638235      PMCID: PMC41385          DOI: 10.1073/pnas.92.16.7590

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  12 in total

1.  Immuno-PCR: very sensitive antigen detection by means of specific antibody-DNA conjugates.

Authors:  T Sano; C L Smith; C R Cantor
Journal:  Science       Date:  1992-10-02       Impact factor: 47.728

2.  Immunoselective cell separation.

Authors:  J Wormmeester; F Stiekema; C de Groot
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

3.  A general method for site-specific incorporation of unnatural amino acids into proteins.

Authors:  C J Noren; S J Anthony-Cahill; M C Griffith; P G Schultz
Journal:  Science       Date:  1989-04-14       Impact factor: 47.728

4.  Synthesis, photochemistry, and biological activity of a caged photolabile acetylcholine receptor ligand.

Authors:  T Milburn; N Matsubara; A P Billington; J B Udgaonkar; J W Walker; B K Carpenter; W W Webb; J Marque; W Denk; J A McCray
Journal:  Biochemistry       Date:  1989-01-10       Impact factor: 3.162

5.  Fluorescamine: a reagent for assay of amino acids, peptides, proteins, and primary amines in the picomole range.

Authors:  S Udenfriend; S Stein; P Böhlen; W Dairman; W Leimgruber; M Weigele
Journal:  Science       Date:  1972-11-24       Impact factor: 47.728

6.  Photocleavable biotinylated ligands for affinity chromatography.

Authors:  C Thiele; F Fahrenholz
Journal:  Anal Biochem       Date:  1994-05-01       Impact factor: 3.365

7.  Site-specific incorporation of novel backbone structures into proteins.

Authors:  J A Ellman; D Mendel; P G Schultz
Journal:  Science       Date:  1992-01-10       Impact factor: 47.728

8.  Site-directed isotope labelling and FTIR spectroscopy of bacteriorhodopsin.

Authors:  S Sonar; C P Lee; M Coleman; N Patel; X Liu; T Marti; H G Khorana; U L RajBhandary; K J Rothschild
Journal:  Nat Struct Biol       Date:  1994-08

9.  Deficient DNA binding of an apurinic/apyrimidinic DNA endonuclease activity from xeroderma pigmentosum cells.

Authors:  L K Bickley; M W Lambert
Journal:  Cell Biol Int Rep       Date:  1988-03

10.  A chemically cleavable biotinylated nucleotide: usefulness in the recovery of protein-DNA complexes from avidin affinity columns.

Authors:  M Shimkus; J Levy; T Herman
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

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  27 in total

1.  Proteomic analysis of the androgen receptor via MS-compatible purification of biotinylated protein on streptavidin resin.

Authors:  Ryan J Austin; Heidi M Smidansky; Carly A Holstein; Deborah K Chang; Angela Epp; Neil C Josephson; Daniel B Martin
Journal:  Proteomics       Date:  2011-12-12       Impact factor: 3.984

2.  Photo-assisted peptide enrichment in protein complex cross-linking analysis of a model homodimeric protein using mass spectrometry.

Authors:  Funing Yan; Fa-Yun Che; Edward Nieves; Louis M Weiss; Ruth H Angeletti; Andras Fiser
Journal:  Proteomics       Date:  2011-09-06       Impact factor: 3.984

3.  Photocleavable peptide-oligonucleotide conjugates for protein kinase assays by MALDI-TOF MS.

Authors:  Guangchang Zhou; Faraz Khan; Qing Dai; Juliesta E Sylvester; Stephen J Kron
Journal:  Mol Biosyst       Date:  2012-07-06

4.  Photochemical cleavage of leader peptides.

Authors:  Noah Bindman; Remco Merkx; Robert Koehler; Nicholas Herrman; Wilfred A van der Donk
Journal:  Chem Commun (Camb)       Date:  2010-11-02       Impact factor: 6.222

5.  A novel Doxorubicin prodrug with controllable photolysis activation for cancer chemotherapy.

Authors:  Stuart Ibsen; Eran Zahavy; Wolf Wrasdilo; Michael Berns; Michael Chan; Sadik Esener
Journal:  Pharm Res       Date:  2010-07-02       Impact factor: 4.200

6.  Photocleavable biotin phosphoramidite for 5'-end-labeling, affinity purification and phosphorylation of synthetic oligonucleotides.

Authors:  J Olejnik; E Krzymańska-Olejnik; K J Rothschild
Journal:  Nucleic Acids Res       Date:  1996-01-15       Impact factor: 16.971

7.  Surface-enhanced transmission mode desorption electrospray ionization: increasing the specificity of ambient ionization mass spectrometric analyses.

Authors:  Joseph E Chipuk; Michael H Gelb; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2010-01-01       Impact factor: 6.986

8.  Photocleavage-based affinity purification and printing of cell-free expressed proteins: application to proteome microarrays.

Authors:  Mark Lim; Kenneth J Rothschild
Journal:  Anal Biochem       Date:  2008-08-12       Impact factor: 3.365

9.  Enrichment and site mapping of O-linked N-acetylglucosamine by a combination of chemical/enzymatic tagging, photochemical cleavage, and electron transfer dissociation mass spectrometry.

Authors:  Zihao Wang; Namrata D Udeshi; Meaghan O'Malley; Jeffrey Shabanowitz; Donald F Hunt; Gerald W Hart
Journal:  Mol Cell Proteomics       Date:  2009-08-19       Impact factor: 5.911

10.  Label-free biomarker detection from whole blood.

Authors:  Eric Stern; Aleksandar Vacic; Nitin K Rajan; Jason M Criscione; Jason Park; Bojan R Ilic; David J Mooney; Mark A Reed; Tarek M Fahmy
Journal:  Nat Nanotechnol       Date:  2009-12-13       Impact factor: 39.213

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