Literature DB >> 7618878

Conversion of chlorobiphenyls into phenylhexadienoates and benzoates by the enzymes of the upper pathway for polychlorobiphenyl degradation encoded by the bph locus of Pseudomonas sp. strain LB400.

M Seeger1, K N Timmis, B Hofer.   

Abstract

Metabolism of 21 chlorobiphenyls by the enzymes of the upper biphenyl catabolic pathway encoded by the bph locus of Pseudomonas sp. strain LB400 was investigated by using recombinant strains harboring gene cassettes containing bphABC or bphABCD. The enzymes of the upper pathway were generally able to metabolize mono- and dichlorinated biphenyls but only partially transform most trichlorinated congeners investigated: 14 of 15 mono- and dichlorinated and 2 of 6 trichlorinated congeners were converted into benzoates. All mono- and at least 8 of 12 dichlorinated congeners were attacked by the bphA-encoded biphenyl dioxygenase virtually exclusively at ortho and meta carbons. This enzyme exhibited a high degree of selectivity for the aromatic ring to be attacked, with the order of ring preference being non- > ortho- > meta- > para-substituted for mono- and dichlorinated congeners. The influence of the chlorine substitution pattern of the metabolized ring on benzoate formation resembled its influence on the reactivity of initial dioxygenation, suggesting that the rate of benzoate formation may frequently be determined by the rate of initial attack. The absorption spectra of phenylhexadienoates formed correlated with the presence or absence of a chlorine substituent at an ortho position.

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Year:  1995        PMID: 7618878      PMCID: PMC167538          DOI: 10.1128/aem.61.7.2654-2658.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  15 in total

1.  High efficiency transformation of E. coli by high voltage electroporation.

Authors:  W J Dower; J F Miller; C W Ragsdale
Journal:  Nucleic Acids Res       Date:  1988-07-11       Impact factor: 16.971

2.  Rapid assay for screening and characterizing microorganisms for the ability to degrade polychlorinated biphenyls.

Authors:  D L Bedard; R Unterman; L H Bopp; M J Brennan; M L Haberl; C Johnson
Journal:  Appl Environ Microbiol       Date:  1986-04       Impact factor: 4.792

3.  Degradation of polychlorinated biphenyls by two species of Achromobacter.

Authors:  M Ahmed; D D Focht
Journal:  Can J Microbiol       Date:  1973-01       Impact factor: 2.419

4.  Biodegradation of chemicals of environmental concern.

Authors:  M Alexander
Journal:  Science       Date:  1981-01-09       Impact factor: 47.728

5.  Nucleotide sequencing and transcriptional mapping of the genes encoding biphenyl dioxygenase, a multicomponent polychlorinated-biphenyl-degrading enzyme in Pseudomonas strain LB400.

Authors:  B D Erickson; F J Mondello
Journal:  J Bacteriol       Date:  1992-05       Impact factor: 3.490

6.  Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system.

Authors:  F W Studier
Journal:  J Mol Biol       Date:  1991-05-05       Impact factor: 5.469

7.  Genetic analysis of a Pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradation.

Authors:  B Hofer; L D Eltis; D N Dowling; K N Timmis
Journal:  Gene       Date:  1993-08-16       Impact factor: 3.688

8.  The biphenyl/polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymes.

Authors:  B Hofer; S Backhaus; K N Timmis
Journal:  Gene       Date:  1994-06-24       Impact factor: 3.688

9.  A DNA module encoding bph genes for the degradation of polychlorinated biphenyls (PCBs).

Authors:  D N Dowling; R Pipke; D F Dwyer
Journal:  FEMS Microbiol Lett       Date:  1993-10-15       Impact factor: 2.742

10.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

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  35 in total

1.  Dehalogenation, denitration, dehydroxylation, and angular attack on substituted biphenyls and related compounds by a biphenyl dioxygenase.

Authors:  M Seeger; B Cámara; B Hofer
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

2.  Substrate specificity and expression of three 2,3-dihydroxybiphenyl 1,2-dioxygenases from Rhodococcus globerulus strain P6.

Authors:  David B McKay; Matthias Prucha; Walter Reineke; Kenneth N Timmis; Dietmar H Pieper
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

Review 3.  Biphenyl dioxygenases: functional versatilities and directed evolution.

Authors:  Kensuke Furukawa; Hikaru Suenaga; Masatoshi Goto
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

4.  Biphenyl and benzoate metabolism in a genomic context: outlining genome-wide metabolic networks in Burkholderia xenovorans LB400.

Authors:  V J Denef; J Park; T V Tsoi; J-M Rouillard; H Zhang; J A Wibbenmeyer; W Verstraete; E Gulari; S A Hashsham; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

5.  Characterization of biphenyl dioxygenase sequences and activities encoded by the metagenomes of highly polychlorobiphenyl-contaminated soils.

Authors:  Christine Standfuss-Gabisch; Djamila Al-Halbouni; Bernd Hofer
Journal:  Appl Environ Microbiol       Date:  2012-02-10       Impact factor: 4.792

6.  Expression, purification, crystallization and preliminary crystallographic studies of cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase from Pandoraea pnomenusa B-356.

Authors:  Dipak N Patil; Shailly Tomar; Michel Sylvestre; Pravindra Kumar
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

7.  Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400.

Authors:  V J Denef; J A Klappenbach; M A Patrauchan; C Florizone; J L M Rodrigues; T V Tsoi; W Verstraete; L D Eltis; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

8.  Influence of chlorine substituents on rates of oxidation of chlorinated biphenyls by the biphenyl dioxygenase of Burkholderia sp. strain LB400.

Authors:  C M Arnett; J V Parales; J D Haddock
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

9.  Anaerobic crystallization and initial X-ray diffraction data of biphenyl 2,3-dioxygenase from Burkholderia xenovorans LB400: addition of agarose improved the quality of the crystals.

Authors:  Pravindra Kumar; Leticia Gómez-Gil; Mahmood Mohammadi; Michel Sylvestre; Lindsay D Eltis; Jeffrey T Bolin
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-21

10.  Evidence that Formation of Protoanemonin from Metabolites of 4-Chlorobiphenyl Degradation Negatively Affects the Survival of 4-Chlorobiphenyl-Cometabolizing Microorganisms.

Authors:  R Blasco; M Mallavarapu; R Wittich; K N Timmis; D H Pieper
Journal:  Appl Environ Microbiol       Date:  1997-02       Impact factor: 4.792

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