Literature DB >> 7556079

Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition.

J Sakai1, R M Chalmers, N Kleckner.   

Abstract

The Tn10 transposition reaction has been reconstituted in vitro on short linear substrate fragments encoding transposon ends. This permits the direct detection of protein-DNA complexes formed during transposition by gel retardation analysis. We demonstrate that a stable synaptic complex containing transposase and a pair of transposon ends forms rapidly and efficiently, prior and prerequisite to the double-strand cleavages involved in transposon excision. These observations extend the general analogies between the Tn10 and Mu transposition reactions, and also reveal significant differences between the two cases. The speed and simplicity of synaptic complex formation in the Tn10/IS10 reaction is suitable for a modular insertion sequence. In contrast, the relative slowness and complexity of this process in the Mu is necessary to permit transposition immunity and control of transposition by Mu repressor protein, two features specifically important for a temperate bacteriophage. Further dissection of the reaction leads to a tentative working model for events preceding the first double-strand cleavage.

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Year:  1995        PMID: 7556079      PMCID: PMC394522          DOI: 10.1002/j.1460-2075.1995.tb00112.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  41 in total

1.  Tn10 insertion specificity is strongly dependent upon sequences immediately adjacent to the target-site consensus sequence.

Authors:  J Bender; N Kleckner
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-01       Impact factor: 11.205

2.  Assembly of the active form of the transposase-Mu DNA complex: a critical control point in Mu transposition.

Authors:  M Mizuuchi; T A Baker; K Mizuuchi
Journal:  Cell       Date:  1992-07-24       Impact factor: 41.582

3.  DNA-promoted assembly of the active tetramer of the Mu transposase.

Authors:  T A Baker; K Mizuuchi
Journal:  Genes Dev       Date:  1992-11       Impact factor: 11.361

Review 4.  Mechanistic aspects of DNA transposition.

Authors:  D B Haniford; G Chaconas
Journal:  Curr Opin Genet Dev       Date:  1992-10       Impact factor: 5.578

5.  The Mu transpositional enhancer can function in trans: requirement of the enhancer for synapsis but not strand cleavage.

Authors:  M G Surette; G Chaconas
Journal:  Cell       Date:  1992-03-20       Impact factor: 41.582

6.  Excision of Tn10 from the donor site during transposition occurs by flush double-strand cleavages at the transposon termini.

Authors:  H W Benjamin; N Kleckner
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

7.  Inversion of the phosphate chirality at the target site of Mu DNA strand transfer: evidence for a one-step transesterification mechanism.

Authors:  K Mizuuchi; K Adzuma
Journal:  Cell       Date:  1991-07-12       Impact factor: 41.582

8.  Tn7 transposition in vitro proceeds through an excised transposon intermediate generated by staggered breaks in DNA.

Authors:  R Bainton; P Gamas; N L Craig
Journal:  Cell       Date:  1991-05-31       Impact factor: 41.582

9.  HIV-1 DNA integration: mechanism of viral DNA cleavage and DNA strand transfer.

Authors:  A Engelman; K Mizuuchi; R Craigie
Journal:  Cell       Date:  1991-12-20       Impact factor: 41.582

10.  Binding of the IS903 transposase to its inverted repeat in vitro.

Authors:  K M Derbyshire; N D Grindley
Journal:  EMBO J       Date:  1992-09       Impact factor: 11.598

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  38 in total

1.  Tn10 transpososome assembly involves a folded intermediate that must be unfolded for target capture and strand transfer.

Authors:  J S Sakai; N Kleckner; X Yang; A Guhathakurta
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

2.  The nicking step in V(D)J recombination is independent of synapsis: implications for the immune repertoire.

Authors:  K Yu; M R Lieber
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

3.  Protein-DNA contacts and conformational changes in the Tn10 transpososome during assembly and activation for cleavage.

Authors:  P Crellin; R Chalmers
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

4.  DNA-binding activity and subunit interaction of the mariner transposase.

Authors:  L Zhang; A Dawson; D J Finnegan
Journal:  Nucleic Acids Res       Date:  2001-09-01       Impact factor: 16.971

5.  Determinants for hairpin formation in Tn10 transposition.

Authors:  J S Allingham; S J Wardle; D B Haniford
Journal:  EMBO J       Date:  2001-06-01       Impact factor: 11.598

6.  Architecture of the Tn7 posttransposition complex: an elaborate nucleoprotein structure.

Authors:  Jason W Holder; Nancy L Craig
Journal:  J Mol Biol       Date:  2010-06-09       Impact factor: 5.469

7.  IHF-independent assembly of the Tn10 strand transfer transpososome: implications for inhibition of disintegration.

Authors:  Barry J Stewart; Simon J Wardle; David B Haniford
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

8.  Formation of a nucleoprotein complex containing Tn7 and its target DNA regulates transposition initiation.

Authors:  Zachary Skelding; Robert Sarnovsky; Nancy L Craig
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

9.  The positive and negative regulation of Tn10 transposition by IHF is mediated by structurally asymmetric transposon arms.

Authors:  Sven Sewitz; Paul Crellin; Ronald Chalmers
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

10.  Early intermediates of mariner transposition: catalysis without synapsis of the transposon ends suggests a novel architecture of the synaptic complex.

Authors:  Karen Lipkow; Nicolas Buisine; David J Lampe; Ronald Chalmers
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

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