Literature DB >> 12169640

IHF-independent assembly of the Tn10 strand transfer transpososome: implications for inhibition of disintegration.

Barry J Stewart1, Simon J Wardle, David B Haniford.   

Abstract

The frequency of DNA transposition in transposition systems that employ a strand transfer step may be significantly affected by the occurrence of a disintegration reaction, a reaction that reverses the strand transfer event. We have asked whether disintegration occurs in the Tn10 transposition system. We show that disintegration substrates (substrates constituting one half of the strand transfer product) are assembled into a transpososome that mimics the strand transfer intermediate. This strand transfer transpososome (STT) does appear to support an intermolecular disintegration reaction, but only at a very low level. Strikingly, assembly of the STT is not dependent on IHF, a host protein that is required for de novo assembly of all previously characterized Tn10 transpososomes. We suggest that disintegration substrates are able to form both transposon end and target type contacts with transposase because of their enhanced conformational flexibility. This probably allows the conformation of DNA within the complex that prevents the destructive disintegration reaction, and is responsible for relaxing the DNA sequence requirements for STT formation relative to other Tn10 transpososomes.

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Year:  2002        PMID: 12169640      PMCID: PMC126164          DOI: 10.1093/emboj/cdf425

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  30 in total

1.  Single active site catalysis of the successive phosphoryl transfer steps by DNA transposases: insights from phosphorothioate stereoselectivity.

Authors:  A K Kennedy; D B Haniford; K Mizuuchi
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

2.  Tn10 transpososome assembly involves a folded intermediate that must be unfolded for target capture and strand transfer.

Authors:  J S Sakai; N Kleckner; X Yang; A Guhathakurta
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

3.  Substrate recognition and induced DNA deformation by transposase at the target-capture stage of Tn10 transposition.

Authors:  P A Pribil; D B Haniford
Journal:  J Mol Biol       Date:  2000-10-20       Impact factor: 5.469

4.  Determinants for hairpin formation in Tn10 transposition.

Authors:  J S Allingham; S J Wardle; D B Haniford
Journal:  EMBO J       Date:  2001-06-01       Impact factor: 11.598

5.  Tn10 transposition via a DNA hairpin intermediate.

Authors:  A K Kennedy; A Guhathakurta; N Kleckner; D B Haniford
Journal:  Cell       Date:  1998-10-02       Impact factor: 41.582

6.  IHF modulation of Tn10 transposition: sensory transduction of supercoiling status via a proposed protein/DNA molecular spring.

Authors:  R Chalmers; A Guhathakurta; H Benjamin; N Kleckner
Journal:  Cell       Date:  1998-05-29       Impact factor: 41.582

7.  Stimulation of V(D)J cleavage by high mobility group proteins.

Authors:  D C van Gent; K Hiom; T T Paull; M Gellert
Journal:  EMBO J       Date:  1997-05-15       Impact factor: 11.598

8.  A new set of Mu DNA transposition intermediates: alternate pathways of target capture preceding strand transfer.

Authors:  D Z Naigamwalla; G Chaconas
Journal:  EMBO J       Date:  1997-09-01       Impact factor: 11.598

9.  Stereospecificity of reactions catalyzed by HIV-1 integrase.

Authors:  J L Gerton; D Herschlag; P O Brown
Journal:  J Biol Chem       Date:  1999-11-19       Impact factor: 5.157

10.  RAG1/2-mediated resolution of transposition intermediates: two pathways and possible consequences.

Authors:  M Melek; M Gellert
Journal:  Cell       Date:  2000-06-09       Impact factor: 41.582

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  4 in total

1.  Architecture of the Tn7 posttransposition complex: an elaborate nucleoprotein structure.

Authors:  Jason W Holder; Nancy L Craig
Journal:  J Mol Biol       Date:  2010-06-09       Impact factor: 5.469

2.  The positive and negative regulation of Tn10 transposition by IHF is mediated by structurally asymmetric transposon arms.

Authors:  Sven Sewitz; Paul Crellin; Ronald Chalmers
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

3.  The dynamic Mu transpososome: MuB activation prevents disintegration.

Authors:  Kathryn M Lemberg; Caterina T H Schweidenback; Tania A Baker
Journal:  J Mol Biol       Date:  2007-10-03       Impact factor: 5.469

4.  Control of transposase activity within a transpososome by the configuration of the flanking DNA segment of the transposon.

Authors:  Michiyo Mizuuchi; Phoebe A Rice; Simon J Wardle; David B Haniford; Kiyoshi Mizuuchi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-04       Impact factor: 11.205

  4 in total

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