Literature DB >> 7543678

Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site.

M F Polz1, C M Cavanaugh.   

Abstract

Microbial community structure in natural environments has remained largely unexplored yet is generally considered to be complex. It is shown here that in a Mid-Atlantic Ridge hydrothermal vent habitat, where food webs depend on prokaryotic primary production, the surface microbial community consists largely of only one bacterial phylogenetic type (phylotype) as indicated by the dominance of a single 16S rRNA sequence. The main part of its population occurs as an ectosymbiont on the dominant animals, the shrimp Rimicaris exoculata, where it grows as a monoculture within the carapace and on the extremities. However, the same bacteria are also the major microbial component of the free-living substrate community. Phylogenetically, this type forms a distinct branch within the epsilon-Proteobacteria. This is different from all previously studied chemoautotrophic endo- and ectosymbioses from hydrothermal vents and other sulfidic habitats in which all the bacterial members cluster within the gamma-Proteobacteria.

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Year:  1995        PMID: 7543678      PMCID: PMC41313          DOI: 10.1073/pnas.92.16.7232

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Comparison of Nucleic Acid Hybridization and Fluorometry for Measurement of the Relationship between RNA/DNA Ratio and Growth Rate in a Marine Bacterium.

Authors:  L Kerkhof; B B Ward
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

2.  Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms.

Authors:  L K Poulsen; G Ballard; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

3.  High diversity in DNA of soil bacteria.

Authors:  V Torsvik; J Goksøyr; F L Daae
Journal:  Appl Environ Microbiol       Date:  1990-03       Impact factor: 4.792

4.  Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells.

Authors:  S J Giovannoni; E F DeLong; G J Olsen; N R Pace
Journal:  J Bacteriol       Date:  1988-02       Impact factor: 3.490

5.  Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology.

Authors:  R I Amann; L Krumholz; D A Stahl
Journal:  J Bacteriol       Date:  1990-02       Impact factor: 3.490

6.  The ribosomal database project.

Authors:  N Larsen; G J Olsen; B L Maidak; M J McCaughey; R Overbeek; T J Macke; T L Marsh; C R Woese
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

7.  Phylogenetic characterization of the epibiotic bacteria associated with the hydrothermal vent polychaete Alvinella pompejana.

Authors:  A Haddad; F Camacho; P Durand; S C Cary
Journal:  Appl Environ Microbiol       Date:  1995-05       Impact factor: 4.792

8.  Ecology of the bacteria of the sulphur cycle with special reference to anoxic-oxic interface environments.

Authors:  B B Jørgensen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1982-09-13       Impact factor: 6.237

9.  Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology.

Authors:  D A Stahl; B Flesher; H R Mansfield; L Montgomery
Journal:  Appl Environ Microbiol       Date:  1988-05       Impact factor: 4.792

10.  Phylogenetic analysis of a highly specific association between ectosymbiotic, sulfur-oxidizing bacteria and a marine nematode.

Authors:  M F Polz; D L Distel; B Zarda; R Amann; H Felbeck; J A Ott; C M Cavanaugh
Journal:  Appl Environ Microbiol       Date:  1994-12       Impact factor: 4.792

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  60 in total

1.  Phylogenetic diversity of bacterial and archaeal communities in the anoxic zone of the Cariaco Basin.

Authors:  V M Madrid; G T Taylor; M I Scranton; A Y Chistoserdov
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; T Brinkhoff; G Muyzer; W Ziebis; J Kuever
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

3.  Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities.

Authors:  K Watanabe; K Watanabe; Y Kodama; K Syutsubo; S Harayama
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

4.  Identification of 16S ribosomal DNA-defined bacterial populations at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; J Kuever; G Muyzer
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

5.  Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities.

Authors:  Andreas Teske; Kai-Uwe Hinrichs; Virginia Edgcomb; Alvin de Vera Gomez; David Kysela; Sean P Sylva; Mitchell L Sogin; Holger W Jannasch
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

6.  Growth and phylogenetic properties of novel bacteria belonging to the epsilon subdivision of the Proteobacteria enriched from Alvinella pompejana and deep-sea hydrothermal vents.

Authors:  B J Campbell; C Jeanthon; J E Kostka; G W Luther; S C Cary
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

7.  Novel bacterial and archaeal lineages from an in situ growth chamber deployed at a Mid-Atlantic Ridge hydrothermal vent.

Authors:  A L Reysenbach; K Longnecker; J Kirshtein
Journal:  Appl Environ Microbiol       Date:  2000-09       Impact factor: 4.792

Review 8.  Search and discovery strategies for biotechnology: the paradigm shift.

Authors:  A T Bull; A C Ward; M Goodfellow
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

9.  Bacterial group II introns in a deep-sea hydrothermal vent environment.

Authors:  Mircea Podar; Lauren Mullineaux; Hon-Ren Huang; Philip S Perlman; Mitchell L Sogin
Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

10.  Analysis of dissimilatory sulfite reductase and 16S rRNA gene fragments from deep-sea hydrothermal sites of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific.

Authors:  Tatsunori Nakagawa; Jun-Ichiro Ishibashi; Akihiko Maruyama; Toshiro Yamanaka; Yusuke Morimoto; Hiroyuki Kimura; Tetsuro Urabe; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

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