Literature DB >> 7509479

On concerted origin of transfer RNAs with complementary anticodons.

S Rodin1, S Ohno, A Rodin.   

Abstract

Pairs of antiparallely oriented consensus tRNAs with complementary anticodons show surprisingly small numbers of mispairings within the 17-bp- long anticodon stem and loop region. Even smaller such complementary distances are shown by illegitimately complementary anticodons, i.e. those with allowed pairing between G and U bases. Accordingly, we suppose that transfer RNAs have emerged concertedly as complementary strands of primordial double helix-like RNA molecules. Replication of such molecules with illegitimately complementary anticodons might generate new synonymous codons for the same pair of amino acids. Logically, the idea of tRNA concerted origin dictates very ancient establishment of direct links between anticodons and the type of amino acids with which pre-tRNAs were to be charged. More specifically, anticodons (first of all, the 2nd base) could selectively target 'their' amino acids, reaction of acylating itself being performed by another non-specific site of pre-tRNA or even by another ribozyme. In all, the above findings and speculations are consistent to the hypercyclic concept (Eigen and Schuster, 1979), and throw new light on the genetic code origin and associated problems. Also favoring this idea are data on complementary codon usage patterns in different genomes.

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Year:  1993        PMID: 7509479     DOI: 10.1007/bf01582088

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  47 in total

1.  A small metalloribozyme with a two-step mechanism.

Authors:  T Pan; O C Uhlenbeck
Journal:  Nature       Date:  1992-08-13       Impact factor: 49.962

2.  VOSTORG: a package of microcomputer programs for sequence analysis and construction of phylogenetic trees.

Authors:  A A Zharkikh; P S Morosov; T L Sitnikova; J S Krushkal
Journal:  Gene       Date:  1991-05-30       Impact factor: 3.688

3.  Nearest-neighbor parameters for G.U mismatches: [formula; see text] is destabilizing in the contexts [formula; see text] and [formula; see text] but stabilizing in [formula; see text].

Authors:  L He; R Kierzek; J SantaLucia; A E Walter; D H Turner
Journal:  Biochemistry       Date:  1991-11-19       Impact factor: 3.162

4.  Structural basis of anticodon loop recognition by glutaminyl-tRNA synthetase.

Authors:  M A Rould; J J Perona; T A Steitz
Journal:  Nature       Date:  1991-07-18       Impact factor: 49.962

Review 5.  Evolution of the genetic code as affected by anticodon content.

Authors:  S Osawa; T H Jukes
Journal:  Trends Genet       Date:  1988-07       Impact factor: 11.639

6.  Genetic code. Modified bases and aminoacylation.

Authors:  U L RajBhandary
Journal:  Nature       Date:  1988-11-10       Impact factor: 49.962

7.  Transfer RNAs with complementary anticodons: could they reflect early evolution of discriminative genetic code adaptors?

Authors:  S Rodin; S Ohno; A Rodin
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-15       Impact factor: 11.205

8.  Some rules in the ordering of nucleotides in the DNA.

Authors:  R Nussinov
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

9.  Universal rule for coding sequence construction: TA/CG deficiency-TG/CT excess.

Authors:  S Ohno
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

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  8 in total

1.  On primordial sense-antisense coding.

Authors:  Andrei S Rodin; Sergei N Rodin; Charles W Carter
Journal:  J Mol Evol       Date:  2009-12-03       Impact factor: 2.395

2.  Four primordial modes of tRNA-synthetase recognition, determined by the (G,C) operational code.

Authors:  S N Rodin; S Ohno
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

3.  Two types of aminoacyl-tRNA synthetases could be originally encoded by complementary strands of the same nucleic acid.

Authors:  S N Rodin; S Ohno
Journal:  Orig Life Evol Biosph       Date:  1995-12       Impact factor: 1.950

4.  The presence of codon-anticodon pairs in the acceptor stem of tRNAs.

Authors:  S Rodin; A Rodin; S Ohno
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

5.  One ancestor for two codes viewed from the perspective of two complementary modes of tRNA aminoacylation.

Authors:  Andrei S Rodin; Eörs Szathmáry; Sergei N Rodin
Journal:  Biol Direct       Date:  2009-01-27       Impact factor: 4.540

6.  Undetected antisense tRNAs in mitochondrial genomes?

Authors:  Hervé Seligmann
Journal:  Biol Direct       Date:  2010-06-16       Impact factor: 4.540

7.  On origin of genetic code and tRNA before translation.

Authors:  Andrei S Rodin; Eörs Szathmáry; Sergei N Rodin
Journal:  Biol Direct       Date:  2011-02-22       Impact factor: 4.540

8.  Amino acid fermentation at the origin of the genetic code.

Authors:  Harold P de Vladar
Journal:  Biol Direct       Date:  2012-02-10       Impact factor: 4.540

  8 in total

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