Literature DB >> 7499192

Disruption of reconstituted nucleosomes. The effect of particle concentration, MgCl2 and KCl concentration, the histone tails, and temperature.

J S Godde1, A P Wolffe.   

Abstract

We find that reconstituted nucleosome cores containing specific DNA sequences dissociate on dilution. This disruption of histone-DNA contacts leading to the release of free DNA is facilitated by the presence of the core histone tails, MgCl2 (5 mM), KCl (60 mM), and temperatures above 0 degree C. Under reaction conditions that are commonly used to assess trans-acting factor access to nucleosomal DNA, histone-DNA contacts are on the threshold of instability. We demonstrate how dilution of reconstituted nucleosomes containing a TATA box can facilitate TBP access to DNA.

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Year:  1995        PMID: 7499192     DOI: 10.1074/jbc.270.46.27399

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

1.  Target DNA chromatinization modulates nicking by L1 endonuclease.

Authors:  G J Cost; A Golding; M S Schlissel; J D Boeke
Journal:  Nucleic Acids Res       Date:  2001-01-15       Impact factor: 16.971

2.  DNA base excision repair of uracil residues in reconstituted nucleosome core particles.

Authors:  Hilde Nilsen; Tomas Lindahl; Alain Verreault
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

3.  Affinity purification of specific chromatin segments from chromosomal loci in yeast.

Authors:  Joachim Griesenbeck; Hinrich Boeger; J Seth Strattan; Roger D Kornberg
Journal:  Mol Cell Biol       Date:  2003-12       Impact factor: 4.272

4.  Chromatin stability at low concentration depends on histone octamer saturation levels.

Authors:  Thomas A Hagerman; Qiang Fu; Benoit Molinié; James Denvir; Stuart Lindsay; Philippe T Georgel
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

5.  Nucleosome translational position, not histone acetylation, determines TFIIIA binding to nucleosomal Xenopus laevis 5S rRNA genes.

Authors:  L Howe; J Ausió
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

6.  Nucleosome positioning by the winged helix transcription factor HNF3.

Authors:  E Y Shim; C Woodcock; K S Zaret
Journal:  Genes Dev       Date:  1998-01-01       Impact factor: 11.361

7.  Differential association of HMG1 and linker histones B4 and H1 with dinucleosomal DNA: structural transitions and transcriptional repression.

Authors:  K Ura; K Nightingale; A P Wolffe
Journal:  EMBO J       Date:  1996-09-16       Impact factor: 11.598

8.  The effect of DNA CpG methylation on the dynamic conformation of a nucleosome.

Authors:  Isabel Jimenez-Useche; Chongli Yuan
Journal:  Biophys J       Date:  2012-12-18       Impact factor: 4.033

9.  Sin mutations of histone H3: influence on nucleosome core structure and function.

Authors:  H Kurumizaka; A P Wolffe
Journal:  Mol Cell Biol       Date:  1997-12       Impact factor: 4.272

10.  Uracil DNA glycosylase activity on nucleosomal DNA depends on rotational orientation of targets.

Authors:  Hope A Cole; Jenna M Tabor-Godwin; Jeffrey J Hayes
Journal:  J Biol Chem       Date:  2009-11-19       Impact factor: 5.157

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