Literature DB >> 7308214

Conformation of chromatin oligomers. A new argument for a change with the hexanucleosome.

C Marion, P Bezot, C Hesse-Bezot, B Roux, J C Bernengo.   

Abstract

Quasielastic laser light scattering measurements have been made on chromatin oligomers to obtain information on the transition in their electrooptical properties, previously observed for the hexameric structures [Marion, C. and Roux, B. (1978) Nucleic Acids Res. 5, 4431-4449]. Translational diffusion coefficients were determined for mononucleosomes to octanucleosomes containing histone H1 over a range of ionic strength. At high ionic strength, oligomers show a linear dependence of the logarithm of diffusion coefficient upon the logarithm of number of nucleosomes. At low ionic strength a change occurs between hexamer and heptamer. Our results agree well with the recent sedimentation data of Osipova et al. [Eur. J. Biochem. (1980) 113, 183-188] and of Butler and Thomas [J. Mol. Biol. (1980) 140, 505-529] showing a change in stability with hexamer. Various models for the arrangements of nucleosomes in the superstructure of chromatin are discussed. All calculations clearly indicate a conformational change with the hexanucleosome and the results suggest that, at low ionic strength, the chromatin adopts a loosely helical structure of 28-nm diameter and 22-nm pitch. These results are also consistent with a discontinuity every sixth nucleosome, corresponding to a turn of the helix. This discontinuity may explain the recent electric dichroism data of Lee et al. [Biochemistry (1981) 20, 1438-1445]. The hexanucleosome structure which we have previously suggested, with the faces of nucleosomes arranged radially to the helical axis has been recently confirmed by Mc Ghee et al. [Cell (1980) 22, 87-96]. With an increase of ionic strength, the helix becomes more regular and compact with a slightly reduced outer diameter and a decreased pitch, the dimensions resembling those proposed for solenoid models.

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Year:  1981        PMID: 7308214     DOI: 10.1111/j.1432-1033.1981.tb05685.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  10 in total

1.  Direct detection of linker DNA bending in defined-length oligomers of chromatin.

Authors:  J Yao; P T Lowary; J Widom
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

Review 2.  What determines the folding of the chromatin fiber?

Authors:  K van Holde; J Zlatanova
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

3.  Molecular flexibility of extended and compacted polynucleosomes. A steady-state fluorescence polarization study.

Authors:  T Härd; P E Nielsen; B Norden
Journal:  Eur Biophys J       Date:  1988       Impact factor: 1.733

4.  The superstructure of chromatin and its condensation mechanism. I. Synchrotron radiation X-ray scattering results.

Authors:  J Bordas; L Perez-Grau; M H Koch; M C Vega; C Nave
Journal:  Eur Biophys J       Date:  1986       Impact factor: 1.733

5.  Three-dimensional structure of extended chromatin fibers as revealed by tapping-mode scanning force microscopy.

Authors:  S H Leuba; G Yang; C Robert; B Samori; K van Holde; J Zlatanova; C Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

6.  The layered organization of nucleosomes in 30 nm chromatin fibers.

Authors:  J A Subirana; S Muñoz-Guerra; J Aymamí; M Radermacher; J Frank
Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

7.  Electric birefringence study of rabbit skeletal myosin subfragments HMM, LMM, and rod in solution.

Authors:  R Cardinaud; J C Bernengo
Journal:  Biophys J       Date:  1985-11       Impact factor: 4.033

8.  The superstructure of chromatin and its condensation mechanism. IV. Enzymatic digestion, thermal denaturation, effect of netropsin and distamycin.

Authors:  M H Koch; Z Sayers; M C Vega; A M Michon
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

9.  Effect of DNA groove binder distamycin A upon chromatin structure.

Authors:  Parijat Majumder; Dipak Dasgupta
Journal:  PLoS One       Date:  2011-10-26       Impact factor: 3.240

10.  Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy.

Authors:  J Bednar; R A Horowitz; J Dubochet; C L Woodcock
Journal:  J Cell Biol       Date:  1995-12       Impact factor: 10.539

  10 in total

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