Literature DB >> 7213619

Affinities of amino acid side chains for solvent water.

R Wolfenden, L Andersson, P M Cullis, C C Southgate.   

Abstract

Equilibria of distribution of amino acid side chains, between their dilute aqueous solutions and the vapor phase at 25 degrees C, have been determined by dynamic vapor pressure measurements. After correction to pH 7, the resulting scale of "hydration potentials", or free energies of transfer from the vapor phase to neutral aqueous solution, spans a range of approximately 22 kcal/mol. The side chain of arginine is much more hydrophilic than those of the other common amino acids, with an equilibrium constant of approximately 10(15) for transfer from the vapor phase to neutral aqueous solution. Hydration potentials are more closely correlated with the relative tendencies of the various amino acids to appear at the surface of globular proteins than had been evident from earlier distribution studies on the free amino acids. Both properties are associated with a pronounced bias in the genetic code.

Entities:  

Mesh:

Substances:

Year:  1981        PMID: 7213619     DOI: 10.1021/bi00507a030

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  148 in total

1.  Kinetics of desolvation-mediated protein-protein binding.

Authors:  C J Camacho; S R Kimura; C DeLisi; S Vajda
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

2.  Pressure-induced unfolding of lysozyme in aqueous guanidinium chloride solution.

Authors:  K Sasahara; K Nitta
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

3.  Interaction between water and polar groups of the helix backbone: an important determinant of helix propensities.

Authors:  P Luo; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

4.  Implicit solvation in the self-consistent mean field theory method: sidechain modelling and prediction of folding free energies of protein mutants.

Authors:  J Mendes; A M Baptista; M A Carrondo; C M Soares
Journal:  J Comput Aided Mol Des       Date:  2001-08       Impact factor: 3.686

5.  Solvation model dependency of helix-coil transition in polyalanine.

Authors:  Yong Peng; Ulrich H E Hansmann
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

6.  Molecular dynamics study of the folding of hydrophobin SC3 at a hydrophilic/hydrophobic interface.

Authors:  Ronen Zangi; Marcel L de Vocht; George T Robillard; Alan E Mark
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

7.  Transmembrane helix predictions revisited.

Authors:  Chien Peter Chen; Andrew Kernytsky; Burkhard Rost
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

8.  Using Cooperatively Folded Peptides To Measure Interaction Energies and Conformational Propensities.

Authors:  Maziar S Ardejani; Evan T Powers; Jeffery W Kelly
Journal:  Acc Chem Res       Date:  2017-07-19       Impact factor: 22.384

9.  Effects of Acids, Bases, and Heteroatoms on Proximal Radial Distribution Functions for Proteins.

Authors:  Bao Linh Nguyen; B Montgomery Pettitt
Journal:  J Chem Theory Comput       Date:  2015-04-14       Impact factor: 6.006

10.  Modeling biophysical and biological properties from the characteristics of the molecular electron density, electron localization and delocalization matrices, and the electrostatic potential.

Authors:  Chérif F Matta
Journal:  J Comput Chem       Date:  2014-04-29       Impact factor: 3.376

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.