Literature DB >> 7145701

Nucleotide sequences of three poriferan 5 S ribosomal RNAs.

E Dams, A Vandenberghe, R De Wachter.   

Abstract

We have determined the nucleotide sequences of 5 S ribosomal RNAs isolated from the sponges Halichondria panicea, Hymeniacidon sanguinea, and Haliclona oculata. The structures can be fitted in a universal five-helix secondary structure model (De Wachter, Chen and Vandenberghe (1982) Biochimie 64, 311-329) applicable to all 5 S RNAs hitherto sequenced. The base pairing scheme proves to be extremely conserved throughout the metazoan kingdom, yet four slightly different variants of the model may be distinguished among the 5 S RNAs from the seven animal phyla investigated until now.

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Year:  1982        PMID： 7145701      PMCID： PMC320872          DOI： 10.1093/nar/10.17.5297

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  14 in total

1.  Use of in vitro 32P labeling in the sequence analysis of nonradioactive tRNAs.

Authors:  M Silberklang; A M Gillum; U L RajBhandary
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  Direct chemical method for sequencing RNA.

Authors:  D A Peattie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

Review 3.  Prediction of pairing schemes in RNA molecules-loop contributions and energy of wobble and non-wobble pairs.

Authors:  J Ninio
Journal:  Biochimie       Date:  1979       Impact factor: 4.079

4.  Structure and function of 5S ribosomal ribonucleic acid from Torulopsis utilis. II. Partial digestion with ribonucleases and derivation of the complete sequence.

Authors:  K Nishikawa; S Takemura
Journal:  J Biochem       Date:  1974-11       Impact factor: 3.387

5.  An unusual 5S rRNA, from Sulfolobus acidocaldarius, and its implications for a general 5S rRNA structure.

Authors:  D A Stahl; K R Luehrsen; C R Woese; N R Pace
Journal:  Nucleic Acids Res       Date:  1981-11-25       Impact factor: 16.971

6.  Determination of the secondary structure of Drosophila melanogaster 5 S RNA by hydroxymethyltrimethylpsoralen crosslinking.

Authors:  J F Thompson; M R Wegnez; J E Hearst
Journal:  J Mol Biol       Date:  1981-04-15       Impact factor: 5.469

7.  Compilation of tRNA sequences.

Authors:  M Sprinzl; D H Gauss
Journal:  Nucleic Acids Res       Date:  1982-01-22       Impact factor: 16.971

8.  The sequence of 5S ribosomal RNA of the crustacean Artemia salina.

Authors:  L Diels; R De Baere; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1981-10-10       Impact factor: 16.971

9.  Molecular relationships between closely related strains and species of nematodes.

Authors:  M H Butler; S M Wall; K R Luehrsen; G E Fox; R M Hecht
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

10.  An improved direct RNA sequence method; its application to Vicia faba 5.8S ribosomal RNA.

Authors:  Y Tanaka; T A Dyer; G G Brownlee
Journal:  Nucleic Acids Res       Date:  1980-03-25       Impact factor: 16.971
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  9 in total

1.  Collection of published 5S, 5.8S and 4.5S ribosomal RNA sequences.

Authors:  V A Erdmann; J Wolters; E Huysmans; R De Wachter
Journal:  Nucleic Acids Res       Date:  1985       Impact factor: 16.971

2.  Nucleotide sequences of the 5.8S rRNAs of a mollusc and a porifer, and considerations regarding the secondary structure of 5.8S rRNA and its interaction with 28S rRNA.

Authors:  D Ursi; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971

3.  Evolution of multicellular animals as deduced from 5S rRNA sequences: a possible early emergence of the Mesozoa.

Authors:  T Ohama; T Kumazaki; H Hori; S Osawa
Journal:  Nucleic Acids Res       Date:  1984-06-25       Impact factor: 16.971

4.  Collection of published 5S and 5.8S ribosomal RNA sequences.

Authors:  V A Erdmann; J Wolters; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1984       Impact factor: 16.971

5.  Nucleotide sequences of 5s rRNAs from sponge Halichondria japonica and tunicate Halocynthia roretzi and their phylogenetic positions.

Authors:  H Komiya; M Hasegawa; S Takemura
Journal:  Nucleic Acids Res       Date:  1983-04-11       Impact factor: 16.971

6.  The nucleotide sequences of 5S rRNAs from a sea-cucumber, a starfish and a sea-urchin.

Authors:  T Ohama; H Hori; S Osawa
Journal:  Nucleic Acids Res       Date:  1983-08-11       Impact factor: 16.971

7.  Collection of published 5S and 5.8S ribosomal RNA sequences.

Authors:  V A Erdmann; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1983-01-11       Impact factor: 16.971

8.  The nucleotide sequences of the 5 S rRNAs of seven molds and a yeast and their use in studying ascomycete phylogeny.

Authors:  M W Chen; J Anné; G Volckaert; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1984-06-25       Impact factor: 16.971

9.  Fresh-water planarias and a marine planaria are relatively dissimilar in the 5S rRNA sequences.

Authors:  T Ohama; T Kumazaki; H Hori; S Osawa; M Takai
Journal:  Nucleic Acids Res       Date:  1983-01-25       Impact factor: 16.971
  9 in total

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