Literature DB >> 7092806

Slow structural changes shown by the 3-nitrotyrosine-237 residue in pig heart [Tyr(3NO2)237] lactate dehydrogenase.

D M Parker, D Jeckel, J J Holbrook.   

Abstract

1. The pKa of the phenolic hydroxy group of the Tyr(3NO2)-237 residue in pig heart [Tyr(3NO2)237]lactate dehydrogenase is 7.2 in the apoenzyme, 7.4 in the enzyme-NADH complex and 7.8 in the enzyme-NADH-oxamate complex. The alkaline shift from apoenzyme to ternary complex is ascribed to the approach of the Glu-107 residue during the movement of the polypeptide loop residues 98-110. 2. The affinities of the nitrated enzyme for NADH and for oxamate (in the presence of NADH) are slightly less than those of the native enzyme. The turnover number for the nitrated enzyme in the pyruvate-to-lactate direction is about 0.75 of the value for the native enzyme. 3. Temperature-jump relaxation experiments of the enzyme saturated with NADH but fractionally saturated with oxamate are interpreted to show that the pKa of the nitrotyrosine residue responds to a protein rearrangement after oxamate binds to the binary enzyme-NADH complex. 4. Transient-kinetic experiments show the environment of the Tyr(3NO2)-237 residue in the enzyme-NADH-pyruvate complex of the steady state to be similar to that in the enzyme-NADH-oxamate inhibitor complex.

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Year:  1982        PMID: 7092806      PMCID: PMC1163670          DOI: 10.1042/bj2010465

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  13 in total

1.  Solution conformation of lactate dehydrogenase as studied by saturation transfer ESR spectroscopy.

Authors:  W E Trommer; K Glöggler
Journal:  Biochim Biophys Acta       Date:  1979-12-07

2.  Structural adaptations of lactate dehydrogenase isozymes.

Authors:  W Eventoff; M G Rossmann; S S Taylor; H J Torff; H Meyer; W Keil; H H Kiltz
Journal:  Proc Natl Acad Sci U S A       Date:  1977-07       Impact factor: 11.205

3.  The Protein Data Bank: a computer-based archival file for macromolecular structures.

Authors:  F C Bernstein; T F Koetzle; G J Williams; E F Meyer; M D Brice; J R Rodgers; O Kennard; T Shimanouchi; M Tasumi
Journal:  J Mol Biol       Date:  1977-05-25       Impact factor: 5.469

4.  Combined coenzyme-substrate analogues of various dehydrogenases. Synthesis of (3S)- and (3R)-5-(3-carboxy-3-hydroxypropyl)nicotinamide adenine dinucleotide and their interaction with (S)- and (R)-lactate-specific dehydrogenases.

Authors:  U Grau; H Kapmeyer; W E Trommer
Journal:  Biochemistry       Date:  1978-10-31       Impact factor: 3.162

5.  Malate dehydrogenase of the cytosol. Ionizations of the enzyme-reduced-coenzyme complex and a comparison with lactate dehydrogenase.

Authors:  A Lodola; D M Parker; R Jeck; J J Holbrook
Journal:  Biochem J       Date:  1978-08-01       Impact factor: 3.857

6.  Protein fluorescence of lactate dehydrogenase.

Authors:  J J Holbrook
Journal:  Biochem J       Date:  1972-07       Impact factor: 3.857

7.  Porcine heart lactate dehydrogenase. Optical rotatory dispersion, thermodynamics, and kinetics of binding reactions.

Authors:  H de A Heck
Journal:  J Biol Chem       Date:  1969-08-25       Impact factor: 5.157

8.  [Action mechanism of lactate dehydrogenase. VI. Alteration of the biochemical properties of lactate dehydrogenase from pig heart muscle by nitration with tetranitromethane].

Authors:  D Jeckel; R Anders; G Pfleiderer
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1971-06

9.  The use of ternary complexes to study ionizations and isomerizations during catalysis by lactate dehydrogenase.

Authors:  J J Holbrook; R A Stinson
Journal:  Biochem J       Date:  1973-04       Impact factor: 3.857

10.  Malate dehydrogenase. X. Fluorescence microtitration studies of D-malate, hydroxymalonate, nicotinamide dinucleotide, and dihydronicotinamide-adenine dinucleotide binding by mitochondrial and supernatant porcine heart enzymes.

Authors:  J J Holbrook; R G Wolfe
Journal:  Biochemistry       Date:  1972-06-20       Impact factor: 3.162

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  12 in total

1.  The approach to the Michaelis complex in lactate dehydrogenase: the substrate binding pathway.

Authors:  Sebastian McClendon; Nick Zhadin; Robert Callender
Journal:  Biophys J       Date:  2005-06-24       Impact factor: 4.033

2.  Lactate dehydrogenase undergoes a substantial structural change to bind its substrate.

Authors:  Linlin Qiu; Miriam Gulotta; Robert Callender
Journal:  Biophys J       Date:  2007-05-04       Impact factor: 4.033

3.  On the pathway of forming enzymatically productive ligand-protein complexes in lactate dehydrogenase.

Authors:  Hua Deng; Scott Brewer; Dung M Vu; Keith Clinch; Robert Callender; R Brian Dyer
Journal:  Biophys J       Date:  2008-04-04       Impact factor: 4.033

4.  Thermodynamic and Structural Adaptation Differences between the Mesophilic and Psychrophilic Lactate Dehydrogenases.

Authors:  Sergei Khrapunov; Eric Chang; Robert H Callender
Journal:  Biochemistry       Date:  2017-07-05       Impact factor: 3.162

5.  Effect of Protein Isotope Labeling on the Catalytic Mechanism of Lactate Dehydrogenase.

Authors:  Tsuyoshi Egawa; Hua Deng; Eric Chang; Robert Callender
Journal:  J Phys Chem B       Date:  2019-11-06       Impact factor: 2.991

6.  Mechanistic Analysis of Fluorescence Quenching of Reduced Nicotinamide Adenine Dinucleotide by Oxamate in Lactate Dehydrogenase Ternary Complexes.

Authors:  Huo-Lei Peng; Robert Callender
Journal:  Photochem Photobiol       Date:  2017-06-22       Impact factor: 3.421

7.  Charge balance in the alpha-hydroxyacid dehydrogenase vacuole: an acid test.

Authors:  A Cortes; D C Emery; D J Halsall; R M Jackson; A R Clarke; J J Holbrook
Journal:  Protein Sci       Date:  1992-07       Impact factor: 6.725

8.  Identification of a nucleic acid helix-destabilizing protein from rat liver as lactate dehydrogenase-5.

Authors:  K R Williams; S Reddigari; G L Patel
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

9.  Active-Loop Dynamics within the Michaelis Complex of Lactate Dehydrogenase from Bacillus stearothermophilus.

Authors:  Beining Nie; Kara Lodewyks; Hua Deng; Ruel Z B Desamero; Robert Callender
Journal:  Biochemistry       Date:  2016-06-30       Impact factor: 3.162

10.  Mechanism of Thermal Adaptation in the Lactate Dehydrogenases.

Authors:  Huo-Lei Peng; Tsuyoshi Egawa; Eric Chang; Hua Deng; Robert Callender
Journal:  J Phys Chem B       Date:  2015-11-24       Impact factor: 2.991

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