Literature DB >> 7063401

A program for reading DNA sequence gels using a small computer equipped with a graphics tablet.

J A Lautenberger.   

Abstract

A program has been written in BASIC that allows DNA sequence gels to be read by a Tektronix model 4052 computer equipped with a graphics tablet. Sequences from each gel are stored on tape for later transfer to a larger computer where they are melded into a complete overall sequence. The program should be adaptable to other small computers.

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Year:  1982        PMID： 7063401      PMCID： PMC326110          DOI： 10.1093/nar/10.1.27

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  7 in total

1.  A strategy of DNA sequencing employing computer programs.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1979-06-11       Impact factor: 16.971

2.  Steps toward computer analysis of nucleotide sequences.

Authors:  T R Gingeras; R J Roberts
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

3.  The recognition site of type II restriction enzyme BglI is interrupted.

Authors:  J A Lautenberger; C T White; N L Haigwood; M H Edgell; C A Hutchison
Journal:  Gene       Date:  1980-05       Impact factor: 3.688

4.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

5.  Computer programs for the assembly of DNA sequences.

Authors:  T R Gingeras; J P Milazzo; D Sciaky; R J Roberts
Journal:  Nucleic Acids Res       Date:  1979-09-25       Impact factor: 16.971

6.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

7.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205
  7 in total
  8 in total

1.  Finding errors in DNA sequences.

Authors:  J Posfai; R J Roberts
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

2.  Sequence gel reading with a portable computer.

Authors:  C A Hutchison
Journal:  Nucleic Acids Res       Date:  1986-02-25       Impact factor: 16.971

3.  An inexpensive semi-automated sequence reader for the Apple II computer.

Authors:  M Komaromy; H Govan
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

4.  A computer program to enter DNA gel reading data into a computer.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

5.  Interactive computer programs for the graphic analysis of nucleotide sequence data.

Authors:  V A Luckow; R K Littlewood; R H Rownd
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

6.  Computer-based image analysis of one-dimensional electrophoretic gels used for the separation of DNA restriction fragments.

Authors:  A J Gray; D E Beecher; M V Olson
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

7.  Molecular cloning and sequence analysis of a chondroitin sulfate proteoglycan cDNA.

Authors:  M A Bourdon; A Oldberg; M Pierschbacher; E Ruoslahti
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

8.  Cloning and sequence analysis of rat bone sialoprotein (osteopontin) cDNA reveals an Arg-Gly-Asp cell-binding sequence.

Authors:  A Oldberg; A Franzén; D Heinegård
Journal:  Proc Natl Acad Sci U S A       Date:  1986-12       Impact factor: 11.205
  8 in total

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