Literature DB >> 273907

"Two out of three": an alternative method for codon reading.

U Lagerkvist.   

Abstract

An alternative method for codon reading, whereby only the first two codon nucleotides are recognized by the anticodon, is discussed and the experimental evidence for this "two of three" reading method is reviewed. Misreading of codons by the "two out of three" method could pose a significant threat to the fidelity of protein synthesis unless the genetic code is organized in such a way as to prevent this method from being used when it might compromise translational fidelity. Inspection of the genetic code shows that it is arranged in such a way that the "two out of three" reading method can be used without translational errors.

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Year:  1978        PMID: 273907      PMCID: PMC392419          DOI: 10.1073/pnas.75.4.1759

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  15 in total

1.  On the physical basis for ambiguity in genetic coding interactions.

Authors:  H J Grosjean; S de Henau; D M Crothers
Journal:  Proc Natl Acad Sci U S A       Date:  1978-02       Impact factor: 11.205

2.  Coding properties of an ochre-suppressing derivative of Escherichia coli tRNAITyr.

Authors:  S I Feinstein; S Altman
Journal:  J Mol Biol       Date:  1977-05-25       Impact factor: 5.469

3.  Analysis of specific misreading in Escherichia coli.

Authors:  P Strigini; E Brickman
Journal:  J Mol Biol       Date:  1973-04-25       Impact factor: 5.469

4.  Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein.

Authors:  W Min Jou; G Haegeman; M Ysebaert; W Fiers
Journal:  Nature       Date:  1972-05-12       Impact factor: 49.962

5.  Glycine transfer RNA of Escherichia coli. II. Impaired GGA-recognition in strains containing a genetically altered transfer RNA; reversal by a secondary suppressor mutation.

Authors:  J Carbon; C Squires; C W Hill
Journal:  J Mol Biol       Date:  1970-09-28       Impact factor: 5.469

6.  Instability of a missense suppressor resulting from a duplication of genetic material.

Authors:  C W Hill; J Foulds; L Soll; P Berg
Journal:  J Mol Biol       Date:  1969-02-14       Impact factor: 5.469

7.  Uridin-5-oxy acetic acid: a new minor constituent from E. coli valine transfer RNA I.

Authors:  K Murao; M Saneyoshi; F Harada; S Nishimura
Journal:  Biochem Biophys Res Commun       Date:  1970-02-20       Impact factor: 3.575

8.  Codon-acticodon recognition in the valine codon family.

Authors:  S K Mitra; F Lustig; B Akesson; U Lagerkvist
Journal:  J Biol Chem       Date:  1977-01-25       Impact factor: 5.157

9.  Codon specificity of UGA suppressor tRNATrp from Escherichia coli.

Authors:  R H Buckingham; C G Kurland
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Glycine transfer RNA of Escherichia coli. I. Structural genes for two glycine tRNA species.

Authors:  C Squires; J Carbon; C W Hill
Journal:  J Mol Biol       Date:  1970-09-28       Impact factor: 5.469

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  80 in total

1.  Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.

Authors:  Michael O'Connor
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

2.  Unassigned codons, nonsense suppression, and anticodon modifications in the evolution of the genetic code.

Authors:  Peter T S van der Gulik; Wouter D Hoff
Journal:  J Mol Evol       Date:  2011-11-11       Impact factor: 2.395

3.  The rules of variation: amino acid exchange according to the rotating circular genetic code.

Authors:  Fernando Castro-Chavez
Journal:  J Theor Biol       Date:  2010-04-03       Impact factor: 2.691

4.  A new classification scheme of the genetic code.

Authors:  Thomas Wilhelm; Svetlana Nikolajewa
Journal:  J Mol Evol       Date:  2004-11       Impact factor: 2.395

Review 5.  Recent evidence for evolution of the genetic code.

Authors:  S Osawa; T H Jukes; K Watanabe; A Muto
Journal:  Microbiol Rev       Date:  1992-03

6.  Transfer RNA genes in the mitochondrial genome from a liverwort, Marchantia polymorpha: the absence of chloroplast-like tRNAs.

Authors:  K Oda; K Yamato; E Ohta; Y Nakamura; M Takemura; N Nozato; K Akashi; K Ohyama
Journal:  Nucleic Acids Res       Date:  1992-07-25       Impact factor: 16.971

7.  Pathogenic mechanism of a human mitochondrial tRNAPhe mutation associated with myoclonic epilepsy with ragged red fibers syndrome.

Authors:  Jiqiang Ling; Hervé Roy; Daoming Qin; Mary Anne T Rubio; Juan D Alfonzo; Kurt Fredrick; Michael Ibba
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

8.  The modified wobble nucleoside uridine-5-oxyacetic acid in tRNAPro(cmo5UGG) promotes reading of all four proline codons in vivo.

Authors:  S Joakim Nasvall; Peng Chen; Glenn R Bjork
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

9.  Transcription attenuation in Salmonella typhimurium: the significance of rare leucine codons in the leu leader.

Authors:  P W Carter; J M Bartkus; J M Calvo
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

10.  A cluster of six tRNA genes in Drosophila mitochondrial DNA that includes a gene for an unusual tRNAserAGY.

Authors:  D O Clary; D R Wolstenholme
Journal:  Nucleic Acids Res       Date:  1984-03-12       Impact factor: 16.971

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