Literature DB >> 6946430

Promoter sequence of fibroin gene assigned by in vitro transcription system.

Y Tsujimoto, S Hirose, M Tsuda, Y Suzuki.   

Abstract

We have shown that the silk fibroin gene from Bombyx mori is faithfully transcribed in an in vitro transcription system of the HeLa cell extract prepared by the method of Manley et al. [Manley, J. L., Fire, A., Cano, A., Sharp, P. A. & Gefter, M. L. (1980) Proc. Natl. Acad. Sci. USA 77, 3855-3859]. Using this system and a series of deletion mutants of fibroin gene, we have assigned the promoter sequence of fibroin gene. The 5' boundary of the promoter is around nucleotide position -29, indicating that most of the T-A-T-A-A-A-A sequence (-30 to -24) is essential for the promoter function, where the transcription initiation point of fibroin gene is assigned as nucleotide position +1 [Tsuda, M., Ohshima, Y. & Suzuki, Y. (1979) Proc. Natl. Acad. Sci. USA 76, 4872-4876]. The 3' boundary is around nucleotide position +6. However, to support the efficient, faithful transcription, some additional (more than 26 but less than 41) nucleotides of nonspecific origin are required at the 5' side of -29. Functions ascribed to the promoter region are discussed.

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Year:  1981        PMID: 6946430      PMCID: PMC320268          DOI: 10.1073/pnas.78.8.4838

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

2.  Assumed initiation site of fibroin gene transcription.

Authors:  M Tsuda; Y Ohshima; Y Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

3.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

4.  pBR322 restriction map derived from the DNA sequence: accurate DNA size markers up to 4361 nucleotide pairs long.

Authors:  J G Sutcliffe
Journal:  Nucleic Acids Res       Date:  1978-08       Impact factor: 16.971

5.  Cloning of the silk fibroin gene and its flanking sequences.

Authors:  Y Ohshima; Y Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

6.  Structural analysis of the fibroin gene at the 5' end and its surrounding regions.

Authors:  Y Tsujimoto; Y Suzuki
Journal:  Cell       Date:  1979-02       Impact factor: 41.582

7.  Sequence of three copies of the gene for the major Drosophila heat shock induced protein and their flanking regions.

Authors:  T D Ingolia; E A Craig; B J McCarthy
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

8.  The ovalbumin gene-sequence of putative control regions.

Authors:  C Benoist; K O'Hare; R Breathnach; P Chambon
Journal:  Nucleic Acids Res       Date:  1980-01-11       Impact factor: 16.971

9.  The DNA sequence of Bombyx mori fibroin gene including the 5' flanking, mRNA coding, entire intervening and fibroin protein coding regions.

Authors:  Y Tsujimoto; Y Suzuki
Journal:  Cell       Date:  1979-10       Impact factor: 41.582

10.  Selective and accurate initiation of transcription at the Ad2 major late promotor in a soluble system dependent on purified RNA polymerase II and DNA.

Authors:  P A Weil; D S Luse; J Segall; R G Roeder
Journal:  Cell       Date:  1979-10       Impact factor: 41.582

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  29 in total

1.  DNA superhelicity affects the formation of transcription preinitiation complex on eukaryotic genes differently.

Authors:  M Mizutani; K Ura; S Hirose
Journal:  Nucleic Acids Res       Date:  1991-06-11       Impact factor: 16.971

2.  Transcription of a legumin gene from pea (Pisum sativum L.) in vitro.

Authors:  I M Evans; D Bown; G W Lycett; R R Croy; D Boulter; J A Gatehouse
Journal:  Planta       Date:  1985-09       Impact factor: 4.116

3.  Negative supercoiling of DNA facilitates an interaction between transcription factor IID and the fibroin gene promoter.

Authors:  M Mizutani; T Ohta; H Watanabe; H Handa; S Hirose
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-01       Impact factor: 11.205

4.  Presence of a limited number of essential nucleotides in the promoter region of mouse ribosomal RNA gene.

Authors:  T Kishimoto; M Nagamine; T Sasaki; N Takakusa; T Miwa; R Kominami; M Muramatsu
Journal:  Nucleic Acids Res       Date:  1985-05-24       Impact factor: 16.971

5.  Participation of the upstream region of the fibroin gene in the formation of transcription complex in vitro.

Authors:  M Tsuda; S Hirose; Y Suzuki
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

6.  DNA sequence patterns in human, mouse, and rabbit immunoglobulin kappa-genes.

Authors:  S Karlin; G Ghandour
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

7.  DNA sequences required for specific and efficient initiation of transcription at the polyoma virus early promoter.

Authors:  P Jat; U Novak; A Cowie; C Tyndall; R Kamen
Journal:  Mol Cell Biol       Date:  1982-07       Impact factor: 4.272

8.  Regulation of in vitro and in vivo transcription of early-region IV of adenovirus type 5 by multiple cis-acting elements.

Authors:  S Hanaka; T Nishigaki; P A Sharp; H Handa
Journal:  Mol Cell Biol       Date:  1987-07       Impact factor: 4.272

9.  Factors involved in specific transcription by mammalian RNA polymerase II: purification, genetic specificity, and TATA box-promoter interactions of TFIID.

Authors:  N Nakajima; M Horikoshi; R G Roeder
Journal:  Mol Cell Biol       Date:  1988-10       Impact factor: 4.272

10.  Homologous globin cell-free transcription system with comparison of heterologous factors.

Authors:  H E Tolunay; L Yang; W M Kemper; B Safer; W F Anderson
Journal:  Mol Cell Biol       Date:  1984-01       Impact factor: 4.272

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