Literature DB >> 6930666

Convergence and minimal mutation criteria for evaluating early events in tRNA evolution.

R J Cedergren, B LaRue, D Sankoff, G Lapalme, H Grosjean.   

Abstract

The convergence of ancestral sequences independently constructed from different branches of a phylogenetic tree can be used as a test of homology of data sequences. This criterion has shown that all phenylalanine tRNAs are related to a common ancestor, whereas eukaryotic and prokaryotic tyrosine tRNAs may have independent origins. All glycine tRNAs share a common ancestor. The glycine tRNA family splits according to the purine or pyrimidine nature of the first anticodon base prior to the divergence of eukaryotes and prokaryotes. The structural similarity between some prokaryotic glycine and and valine tRNAs is the result of their derivation from a common ancestor that existed previous to the divergence of the different glycine tRNAs. These results support models of genetic code evolution involving the incremental elaboration of earlier, simpler codes.

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Year:  1980        PMID: 6930666      PMCID: PMC349490          DOI: 10.1073/pnas.77.5.2791

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  19 in total

1.  Protamines, histones and the genetic code. New evidence for code evaluations.

Authors:  K Bauer
Journal:  Int J Pept Protein Res       Date:  1976

2.  The nucleotide sequence of a threonine transfer ribonucleic acid from Escherichia coli.

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Journal:  J Biol Chem       Date:  1974-11-10       Impact factor: 5.157

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Authors:  R J Cedergren; J R Cordeau; P Robillard
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Authors:  T H Jukes
Journal:  Nature       Date:  1973-11-02       Impact factor: 49.962

5.  Evolution of transfer RNA.

Authors:  R Holmquist; T H Jukes; S Pangburn
Journal:  J Mol Biol       Date:  1973-06-25       Impact factor: 5.469

Review 6.  Reaction of aminoacyl-tRNA synthetases with heterologous tRNA's.

Authors:  K B Jacobson
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1971

7.  The origin of the genetic code.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1968-12       Impact factor: 5.469

8.  Participation of redundant transfer ribonucleic acids from yeast in protein synthesis.

Authors:  P L Bergquist; D J Burns; C A Plinston
Journal:  Biochemistry       Date:  1968-05       Impact factor: 3.162

Review 9.  Construction of phylogenetic trees.

Authors:  W M Fitch; E Margoliash
Journal:  Science       Date:  1967-01-20       Impact factor: 47.728

10.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

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  19 in total

1.  Stable tRNA-based phylogenies using only 76 nucleotides.

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2.  A potato mitochondrial isoleucine tRNA is coded for by a mitochondrial gene possessing a methionine anticodon.

Authors:  F Weber; A Dietrich; J H Weil; L Maréchal-Drouard
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

3.  Anticodon-dependent conservation of bacterial tRNA gene sequences.

Authors:  Margaret E Saks; John S Conery
Journal:  RNA       Date:  2007-03-22       Impact factor: 4.942

4.  Sequences of initiator and elongator methionine tRNAs in bean mitochondria : Localization of the corresponding genes on maize and wheat mitochondrial genomes.

Authors:  L Marechal; P Guillemaut; J M Grienenberger; G Jeannin; J H Weil
Journal:  Plant Mol Biol       Date:  1986-07       Impact factor: 4.076

5.  Coadaptation of isoacceptor tRNA genes and codon usage bias for translation efficiency in Aedes aegypti and Anopheles gambiae.

Authors:  S K Behura; D W Severson
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6.  Evolution of tRNA recognition systems and tRNA gene sequences.

Authors:  M E Saks; J R Sampson
Journal:  J Mol Evol       Date:  1995-05       Impact factor: 2.395

7.  Detection of a fundamental modular format common to transfer and ribosomal RNAs: second-order spectral analysis.

Authors:  A D Nazarea; D P Bloch; A C Semrau
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

8.  Archetypical features in tRNA families.

Authors:  K Nicoghosian; M Bigras; D Sankoff; R Cedergren
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

9.  The phylogeny of tRNAs seems to confirm the predictions of the coevolution theory of the origin of the genetic code.

Authors:  M Di Giulio
Journal:  Orig Life Evol Biosph       Date:  1995-12       Impact factor: 1.950

10.  Nucleotide sequences of two serine tRNAs with a GGA anticodon: the structure-function relationships in the serine family of E. coli tRNAs.

Authors:  H Grosjean; K Nicoghosian; E Haumont; D Söll; R Cedergren
Journal:  Nucleic Acids Res       Date:  1985-08-12       Impact factor: 16.971

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