Literature DB >> 6929520

Reconstitution of a deoxyribonuclease I-sensitive structure on active genes.

B Gazit, A Panet, H Cedar.   

Abstract

Chicken erythrocyte nuclei have been labeled in the active regions of the chromosome by using the nick translation reaction. In this procedure, accessible areas of the genome are preferentially nicked by the action of pancreatic DNase I and subsequently labeled by using DNA polymerase I from Escherichia coli. These nuclei were employed as a substrate for studying the factors responsible for maintaining the special chromatin conformation of the overall population of active genes. Treatment of nuclei with 0.35 M NaCl resulted in the loss of DNase I sensitivity in the active genes, but this sensitivity could be restored when nuclei were reconstituted with the NaCl eluate. Further purification of the released factors revealed that the HMG (high-mobility group) proteins HMG-14 and HMG-17 are involved in maintaining the conformation of the active regions. These factors are not tissue specific and seem to be involved in the chromosomal structure of most of the active genes.

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Year:  1980        PMID: 6929520      PMCID: PMC348592          DOI: 10.1073/pnas.77.4.1787

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  The structure of the globin genes in chromatin.

Authors:  R Axel; H Cedar; G Felsenfield
Journal:  Biochemistry       Date:  1975-06-03       Impact factor: 3.162

2.  Selective digestion of transcriptionally active ovalbumin genes from oviduct nuclei.

Authors:  A Garel; R Axel
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

3.  Interpretation of the properties of chromatin extracts from mammalian nuclei.

Authors:  A J Marshall; L A Burgoyne
Journal:  Nucleic Acids Res       Date:  1976-04       Impact factor: 16.971

4.  Chromosomal subunits in active genes have an altered conformation.

Authors:  H Weintraub; M Groudine
Journal:  Science       Date:  1976-09-03       Impact factor: 47.728

5.  Renaturation kinetics of cDNA complementary to cytoplamic polyadenylated RNA from rainbow trout testis. Accessibility of transcribed genes to pancreatic DNase.

Authors:  B Levy; G H Dixon
Journal:  Nucleic Acids Res       Date:  1977-04       Impact factor: 16.971

6.  Cell-free transcription of mammalian chromatin: transcription of globin messenger RNA sequences from bone-marrow chromatin with mammalian RNA polymerase.

Authors:  A W Steggles; G N Wilson; J A Kantor; D J Picciano; A K Falvey; W F Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

7.  Partial purification of the template-active fraction of chromatin: a preliminary report.

Authors:  J M Gottesfeld; W T Garrard; G Bagi; R F Wilson; J Bonner
Journal:  Proc Natl Acad Sci U S A       Date:  1974-06       Impact factor: 11.205

8.  Synthesis of globin ribonucleic acid from duck-reticulocyte chromatin in vitro.

Authors:  R Axel; H Cedar; G Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  1973-07       Impact factor: 11.205

9.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

10.  Selective degradation of integrated murine leukemia proviral DNA by deoxyribonucleases.

Authors:  A Panet; H Cedar
Journal:  Cell       Date:  1977-08       Impact factor: 41.582

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  20 in total

1.  Binding of HMG 17 to mononucleosomes of the avian beta-globin gene cluster in erythroid and non-erythroid cells.

Authors:  T W Brotherton; J Reneker; G D Ginder
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

2.  Evidence for methylation as a regulatory mechanism in HLA-DR alpha gene expression.

Authors:  M N Carrington; R D Salter; P Cresswell; J P Ting
Journal:  Immunogenetics       Date:  1985       Impact factor: 2.846

3.  Isolation and distribution of a Drosophila protein preferentially associated with active regions of the genome.

Authors:  B Fleischmann; R Filipski; G Fleischmann
Journal:  Chromosoma       Date:  1989-03       Impact factor: 4.316

4.  The high mobility group proteins HMG 14 and 17, do not prevent the formation of chromatin higher order structure.

Authors:  J D McGhee; D C Rau; G Felsenfeld
Journal:  Nucleic Acids Res       Date:  1982-03-25       Impact factor: 16.971

5.  Selective release of HMG nonhistone proteins during DNase digestion of Tetrahymena chromatin at different stages of the cell cycle.

Authors:  K Hamana; M Zama
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971

6.  Localization of SV40 genes within supercoiled loop domains.

Authors:  B D Nelkin; D M Pardoll; B Vogelstein
Journal:  Nucleic Acids Res       Date:  1980-12-11       Impact factor: 16.971

Review 7.  Transcriptionally active chromatin.

Authors:  R Tsanev
Journal:  Mol Biol Rep       Date:  1983-05       Impact factor: 2.316

8.  Affinity of HMG17 for a mononucleosome is not influenced by the presence of ubiquitin-H2A semihistone but strongly depends on DNA fragment size.

Authors:  P S Swerdlow; A Varshavsky
Journal:  Nucleic Acids Res       Date:  1983-01-25       Impact factor: 16.971

9.  Effect of in vitro methylation at CpG sites on gene expression in a genome functioning autonomously in a vertebrate host.

Authors:  K N Subramanian
Journal:  Nucleic Acids Res       Date:  1982-06-11       Impact factor: 16.971

10.  Nuclease sensitivity of active chromatin.

Authors:  B Gazit; H Cedar
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971

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