Literature DB >> 6871226

The distribution of CR1, and Alu-like family of interspersed repeats, in the chicken genome.

B Olofsson, G Bernardi.   

Abstract

We have studied the distribution of CR1, a family of short interspersed repeats, in the chicken genome; this family is homologous to the AluI family of man and to the B1-B2 families of mouse. Hybridization with a suitable probe showed that the vase majority of CR1 are located on the heaviest major component (1.708) of the genome which only represents 9% of chicken DNA. Some repeats were also found on the 1.702 and 1.704 components, but none on the 1.699 component (components are denoted by their buoyant densities in CsCl). The GC content of the repeats, 48%, matches that, 47%, of the major component mainly harboring it.

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Year:  1983        PMID: 6871226     DOI: 10.1016/0167-4781(83)90143-4

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

1.  Genomic localization of hepatitis B virus in a human hepatoma cell line.

Authors:  M Zerial; J Salinas; J Filipski; G Bernardi
Journal:  Nucleic Acids Res       Date:  1986-11-11       Impact factor: 16.971

2.  Cytogenetic repartition of chicken CR1 sequences evidenced by PRINS in Galliformes and some other birds.

Authors:  Philippe Coullin; B Bed'Hom; J J Candelier; D Vettese; S Maucolin; S Moulin; S A Galkina; A Bernheim; V Volobouev
Journal:  Chromosome Res       Date:  2005-10-24       Impact factor: 5.239

3.  The Bam repeats of the mouse genome belong in several superfamilies the longest of which is over 9 kb in size.

Authors:  M Meunier-Rotival; G Bernardi
Journal:  Nucleic Acids Res       Date:  1984-02-10       Impact factor: 16.971

4.  Recent CR1 non-LTR retrotransposon activity in coscoroba reveals an insertion site preference.

Authors:  Judy St John; Thomas W Quinn
Journal:  BMC Genomics       Date:  2008-11-27       Impact factor: 3.969

5.  The early apoptotic DNA fragmentation targets a small number of specific open chromatin regions.

Authors:  Miriam Di Filippo; Giorgio Bernardi
Journal:  PLoS One       Date:  2009-04-06       Impact factor: 3.240

  5 in total

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