Literature DB >> 6856479

Complete nucleotide sequence of alfalfa mosaic virus RNA3.

R F Barker, N P Jarvis, D V Thompson, L S Loesch-Fries, T C Hall.   

Abstract

A full-length cDNA clone of alfalfa mosaic virus (AMV) RNA3 was prepared and sequenced. The 2,037 base sequence contains two open reading frames of 903 and 666 nucleotides that code for a 32,400 dalton protein (32.4K protein) and the 24,380 dalton coat protein, respectively. A 5'-noncoding sequence of 240 bases preceeding the 32.4K protein contains homologous regions that may have a function in its translation. The intercistronic junction is 49 bases long, the last 36 bases representing the 5'-end of the subgenomic RNA4. The remaining 179 bases comprise the 3'-terminal noncoding sequence.

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Year:  1983        PMID： 6856479      PMCID： PMC325930          DOI： 10.1093/nar/11.9.2881

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  27 in total

1.  Prolonged incubation in calcium chloride improves the competence of Escherichia coli cells.

Authors:  M Dagert; S D Ehrlich
Journal:  Gene       Date:  1979-05       Impact factor: 3.688

2.  Nucleotide sequence of the 3'-noncoding region of alfalfa mosaic virus RNA 4 and its homology with the genomic RNAs.

Authors:  E C Koper-Zwarthoff; F T Brederode; P Walstra; J F Bol
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

3.  Two-step binding of eukaryotic ribosomes to brome mosaic virus RNA3.

Authors:  P Ahlquist; R Dasgupta; D S Shih; D Zimmern; P Kaesberg
Journal:  Nature       Date:  1979-09-27       Impact factor: 49.962

4.  Colony hybridization.

Authors:  M Grunstein; J Wallis
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

5.  Nucleotide sequences at the 5'-termini of the alfalfa mosaic virus RNAs and the intercistronic junction in RNA 3.

Authors:  E C Koper-Zwarthoff; F T Brederode; G Veeneman; J H van Boom; J F Bol
Journal:  Nucleic Acids Res       Date:  1980-12-11       Impact factor: 16.971

6.  Complete nucleotide sequence of brome mosaic virus RNA3.

Authors:  P Ahlquist; V Luckow; P Kaesberg
Journal:  J Mol Biol       Date:  1981-11-25       Impact factor: 5.469

7.  Sequence homology at the 3'-ends of alfalfa mosaic virus RNAs.

Authors:  L Pinck; M Pinck
Journal:  FEBS Lett       Date:  1979-11-01       Impact factor: 4.124

8.  5'-Terminal sequences of eucaryotic mRNA can be cloned with high efficiency.

Authors:  H Land; M Grez; H Hauser; W Lindenmaier; G Schütz
Journal:  Nucleic Acids Res       Date:  1981-05-25       Impact factor: 16.971

9.  Nucleotide sequence of the putative recognition site for coat protein in the RNAs of alfalfa mosaic virus and tobacco streak virus.

Authors:  E C Koper-Zwarthoff; J F Bol
Journal:  Nucleic Acids Res       Date:  1980-08-11       Impact factor: 16.971

10.  Binding of ribosomes to the 5' leader sequence (N = 258) of RNA 3 from alfalfa mosaic virus.

Authors:  M Pinck; C Fritsch; M Ravelonandro; C Thivent; L Pinck
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971
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  22 in total

1.  A conserved hairpin structure in Alfamovirus and Bromovirus subgenomic promoters is required for efficient RNA synthesis in vitro.

Authors:  P C Haasnoot; F T Brederode; R C Olsthoorn; J F Bol
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

Review 2.  A core promoter hairpin is essential for subgenomic RNA synthesis in alfalfa mosaic alfamovirus and is conserved in other Bromoviridae.

Authors:  E M Jaspars
Journal:  Virus Genes       Date:  1998       Impact factor: 2.332

Review 3.  Gene expression from viral RNA genomes.

Authors:  I G Maia; K Séron; A L Haenni; F Bernardi
Journal:  Plant Mol Biol       Date:  1996-10       Impact factor: 4.076

4.  Nucleotide sequences from phaseolin cDNA clones: the major storage proteins from Phaseolus vulgaris are encoded by two unique gene families.

Authors:  J L Slightom; R F Drong; R C Klassy; L M Hoffman
Journal:  Nucleic Acids Res       Date:  1985-09-25       Impact factor: 16.971

5.  A plant viral coat protein RNA binding consensus sequence contains a crucial arginine.

Authors:  P Ansel-McKinney; S W Scott; M Swanson; X Ge; L Gehrke
Journal:  EMBO J       Date:  1996-09-16       Impact factor: 11.598

6.  Selection of initiation sites by eucaryotic ribosomes: effect of inserting AUG triplets upstream from the coding sequence for preproinsulin.

Authors:  M Kozak
Journal:  Nucleic Acids Res       Date:  1984-05-11       Impact factor: 16.971

7.  The complete nucleotide sequence of apple mosaic virus RNA-3.

Authors:  P J Shiel; R H Alrefai; L L Domier; S S Korban; P H Berger
Journal:  Arch Virol       Date:  1995       Impact factor: 2.574

8.  Characterization and engineering of sequences controlling in vivo synthesis of brome mosaic virus subgenomic RNA.

Authors:  R French; P Ahlquist
Journal:  J Virol       Date:  1988-07       Impact factor: 5.103

9.  Striking similarities in amino acid sequence among nonstructural proteins encoded by RNA viruses that have dissimilar genomic organization.

Authors:  J Haseloff; P Goelet; D Zimmern; P Ahlquist; R Dasgupta; P Kaesberg
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

10.  Proposed classification of the bipartite-genomed raspberry bushy dwarf idaeovirus, with tripartite-genomed viruses in the family Bromoviridae.

Authors:  A Ziegler; M A Mayo; A F Murant
Journal:  Arch Virol       Date:  1993       Impact factor: 2.574
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