Literature DB >> 6838970

Anomalous x-ray scattering from terbium-labeled parvalbumin in solution.

R C Miake-Lye, S Doniach, K O Hodgson.   

Abstract

We have used anomalous small-angle x-ray scattering as a structural probe for solutions of rabbit parvalbumin labeled with terbium. This technique makes use of the large changes in the terbium scattering factor that occur when the x-ray energy is tuned around an L3 absorption edge of this heavy-atom label. These changes in scattering result in changes in the small-angle scattering curve of the labeled protein as a whole, which can then be analyzed to derive structural information concerning the distribution of labels in the protein. Based on a Gaussian model for the protein electron density, the mean distance from the terbiums to the protein center of mass is determined to be 13.2 A and is consistent with crystallographic results. Our results demonstrate the usefulness of terbium as an anomalous scattering label and provide criteria to help establish anomalous scattering as a reliable structural technique for proteins in solution.

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Year:  1983        PMID: 6838970      PMCID: PMC1329182          DOI: 10.1016/S0006-3495(83)84440-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  9 in total

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Journal:  Q Rev Biophys       Date:  1978-02       Impact factor: 5.318

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Authors:  O Kratky; I Pilz
Journal:  Q Rev Biophys       Date:  1972-11       Impact factor: 5.318

4.  Carp muscle calcium-binding protein. II. Structure determination and general description.

Authors:  R H Kretsinger; C E Nockolds
Journal:  J Biol Chem       Date:  1973-05-10       Impact factor: 5.157

Review 5.  Structure and evolution of calcium-modulated proteins.

Authors:  R H Kretsinger
Journal:  CRC Crit Rev Biochem       Date:  1980

6.  Muscular parvalbumins: preparative and analytical methods of general applicability.

Authors:  J F Pechére; J Demaille; J P Capony
Journal:  Biochim Biophys Acta       Date:  1971-05-25

7.  Configuration of the four iron atoms in dissolved human hemoglobin as studied by anomalous dispersion.

Authors:  H B Stuhrmann; H Notbohm
Journal:  Proc Natl Acad Sci U S A       Date:  1981-10       Impact factor: 11.205

8.  White lines in L-edge x-ray absorption spectra and their implications for anomalous diffraction studies of biological materials.

Authors:  R C Lye; J C Phillips; D Kaplan; S Doniach; K O Hodgson
Journal:  Proc Natl Acad Sci U S A       Date:  1980-10       Impact factor: 11.205

9.  Lanthanide ion luminescence probes. Characterization of metal ion binding sites and intermetal energy transfer distance measurements in calcium-binding proteins. 1. Parvalbumin.

Authors:  M J Rhee; D R Sudnick; V K Arkle; W D Horrocks
Journal:  Biochemistry       Date:  1981-06-09       Impact factor: 3.162

  9 in total
  9 in total

1.  Multi-wavelength anomalous diffraction using medium-angle X-ray solution scattering (MADMAX).

Authors:  L Makowski; J Bardhan; D Gore; D J Rodi; R F Fischetti
Journal:  Biophys J       Date:  2012-02-21       Impact factor: 4.033

2.  Redistribution of terbium ions across acetylcholine receptor-enriched membranes induced by agonist desensitization.

Authors:  Thomas E Lee; Anthony R Chuang; Matthew S Marek; Sebastian Doniach; Robert H Fairclough
Journal:  Biophys J       Date:  2009-04-08       Impact factor: 4.033

3.  DNA conformations in mismatch repair probed in solution by X-ray scattering from gold nanocrystals.

Authors:  Greg L Hura; Chi-Lin Tsai; Shelley A Claridge; Marc L Mendillo; Jessica M Smith; Gareth J Williams; Alexander J Mastroianni; A Paul Alivisatos; Christopher D Putnam; Richard D Kolodner; John A Tainer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-07       Impact factor: 11.205

Review 4.  Emerging applications of small angle solution scattering in structural biology.

Authors:  Barnali N Chaudhuri
Journal:  Protein Sci       Date:  2015-02-12       Impact factor: 6.725

5.  Recording and Analyzing Nucleic Acid Distance Distributions with X-Ray Scattering Interferometry (XSI).

Authors:  Thomas Zettl; Rhiju Das; Pehr A B Harbury; Daniel Herschlag; Jan Lipfert; Rebecca S Mathew; Xuesong Shi
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2018-06-07

6.  From a structural average to the conformational ensemble of a DNA bulge.

Authors:  Xuesong Shi; Kyle A Beauchamp; Pehr B Harbury; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-31       Impact factor: 11.205

7.  Resonant x-ray scattering and absorption for the global and local structures of Cu-modified metallothioneins in solution.

Authors:  Meiyi Li; Yu-Shan Huang; U-Ser Jeng; I-Jui Hsu; Yewchung Sermon Wu; Ying-Huang Lai; Chiu-Hun Su; Jyh-Fu Lee; Yu Wang; Chia-Ching Chang
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

8.  Anomalous small angle x-ray scattering simulations: proof of concept for distance measurements for nanoparticle-labelled biomacromolecules in solution.

Authors:  Valerie J Pinfield; David J Scott
Journal:  PLoS One       Date:  2014-04-23       Impact factor: 3.240

9.  A molecular ruler for measuring quantitative distance distributions.

Authors:  Rebecca S Mathew-Fenn; Rhiju Das; Joshua A Silverman; Peter A Walker; Pehr A B Harbury
Journal:  PLoS One       Date:  2008-10-17       Impact factor: 3.240

  9 in total

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