Literature DB >> 6725269

Kinetics of ligand binding and quaternary conformational change in the homodimeric hemoglobin from Scapharca inaequivalvis.

E Antonini, F Ascoli, M Brunori, E Chiancone, D Verzili, R J Morris, Q H Gibson.   

Abstract

The kinetics of the reaction with oxygen and carbon monoxide of the homodimeric hemoglobin from the bivalve mollusc Scapharca inaequivalvis has been extensively investigated by flash and dye-laser photolysis, temperature jump relaxation, and stopped flow methods. The results indicate that cooperativity in ligand binding, already observed for oxygen at equilibrium, finds its kinetic counterpart in a large decrease of the oxygen dissociation velocity in the second step of the binding reaction. In the case of carbon monoxide, cooperativity is clearly evident in the increase of the combination velocity constant as the reaction proceeds. Therefore, the ligand-binding kinetics of this dimeric hemoglobin shows the characteristic features of the corresponding reactions of tetrameric hemoglobins. Analysis of the data in terms of the allosteric model proposed by Monod et al. (Monod, J., Wyman, J., and Changeux, J. P. (1965) J. Mol. Biol. 12, 88-118) has shown that the values of the allosteric parameters cannot be fixed uniquely for a dimeric hemoglobin. The rapid changes in absorbance observed at the isosbestic points of unliganded and liganded hemoglobin following laser photolysis provided a value of 7 X 10(4) S-1 at 20 degrees C for the rate of the ligand-free quarternary conformational change, postulated on the basis of cooperative ligand binding. Comparison of the rapid absorbance changes observed during ligand rebinding in this hemoglobin with those observed in tuna hemoglobin indicate that, at full photolysis, binding to the T state is followed by further binding and conversion to the liganded R state; at partial photolysis, population of the liganded T state occurs immediately and is followed by a decay to the liganded R state upon further ligand binding. These new results, in conjunction with previous equilibrium data on the same system, show unequivocally that the presence of two different types of chain is not an absolute prerequisite for cooperativity in hemoglobins, contrary to currently accepted ideas.

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Year:  1984        PMID: 6725269

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  An optical signal correlated with the allosteric transition in Scapharca inaequivalvis HbI.

Authors:  Jeffry C Nichols; William E Royer; Quentin H Gibson
Journal:  Biochemistry       Date:  2006-12-19       Impact factor: 3.162

2.  A milestoning study of the kinetics of an allosteric transition: atomically detailed simulations of deoxy Scapharca hemoglobin.

Authors:  Ron Elber
Journal:  Biophys J       Date:  2007-02-26       Impact factor: 4.033

3.  Ligand migration and binding in the dimeric hemoglobin of Scapharca inaequivalvis.

Authors:  Karin Nienhaus; James E Knapp; Pasquale Palladino; William E Royer; G Ulrich Nienhaus
Journal:  Biochemistry       Date:  2007-11-15       Impact factor: 3.162

4.  Ordered water molecules as key allosteric mediators in a cooperative dimeric hemoglobin.

Authors:  W E Royer; A Pardanani; Q H Gibson; E S Peterson; J M Friedman
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-10       Impact factor: 11.205

5.  Effect of Occluded Ligand Migration on the Kinetics and Structural Dynamics of Homodimeric Hemoglobin.

Authors:  Hanui Kim; Jong Goo Kim; Srinivasan Muniyappan; Tae Wu Kim; Sang Jin Lee; Hyotcherl Ihee
Journal:  J Phys Chem B       Date:  2020-02-19       Impact factor: 2.991

6.  Linkage between ligand binding and the dimer-tetramer equilibrium in the Monod-Wyman-Changeux model of hemoglobin.

Authors:  S J Edelstein; J T Edsall
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

7.  Metastable CO binding sites in the photoproduct of a novel cooperative dimeric hemoglobin.

Authors:  S Song; L Rothberg; D L Rousseau; A Boffi; E Chiancone
Journal:  Biophys J       Date:  1993-11       Impact factor: 4.033

8.  Scapharca inaequivalvis tetrameric hemoglobin A and B chains: cDNA sequencing and genomic organization.

Authors:  M C Piro; A Gambacurta; F Ascoli
Journal:  J Mol Evol       Date:  1996-12       Impact factor: 2.395

9.  Properties of a recombinant human hemoglobin with aspartic acid 99(beta), an important intersubunit contact site, substituted by lysine.

Authors:  H Yanase; S Cahill; J J Martin de Llano; L R Manning; K Schneider; B T Chait; K D Vandegriff; R M Winslow; J M Manning
Journal:  Protein Sci       Date:  1994-08       Impact factor: 6.725

10.  Ultrafast coherent motion and helix rearrangement of homodimeric hemoglobin visualized with femtosecond X-ray solution scattering.

Authors:  Yunbeom Lee; Jong Goo Kim; Sang Jin Lee; Srinivasan Muniyappan; Tae Wu Kim; Hosung Ki; Hanui Kim; Junbeom Jo; So Ri Yun; Hyosub Lee; Kyung Won Lee; Seong Ok Kim; Marco Cammarata; Hyotcherl Ihee
Journal:  Nat Commun       Date:  2021-06-16       Impact factor: 14.919

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