Literature DB >> 6592589

Molecular model of ribosome frameshifting.

R B Weiss.   

Abstract

Normal tRNAs can cause two- and four-base translocation errors by mistranslating certain noncognate codons. Several cases have been reported that reveal the identities of the frameshift-provoking tRNAs--i.e., the shifty tRNAs--and the mRNA sequence encompassing the site of frameshifting--i.e., the shifty codons. Here, a striking uniformity between the anticodon loops of the shifty tRNAs and their shifty codons is described. Stable "offset" anti-codon X codon pairs are postulated for each of the shifty tRNA-shifty codon combinations. This offset anticodon X codon pair leads to two- and four-base translocations when viewed in terms of the reciprocating ratchet mechanism of translocation.

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Year:  1984        PMID: 6592589      PMCID: PMC391798          DOI: 10.1073/pnas.81.18.5797

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Conformation of the anticodon loop intRNA.

Authors:  W Fuller; A Hodgson
Journal:  Nature       Date:  1967-08-19       Impact factor: 49.962

2.  On the structure of yeast tRNA Phe . Complementary-oligonucleotide binding studies.

Authors:  O Pongs; R Bald; E Reinwald
Journal:  Eur J Biochem       Date:  1973-01-03

3.  Binding of complementary pentanucleotides to the anticodon loop of transfer RNA.

Authors:  J Eisinger; P F Spahr
Journal:  J Mol Biol       Date:  1973-01       Impact factor: 5.469

Review 4.  Frameshift mutations.

Authors:  J R Roth
Journal:  Annu Rev Genet       Date:  1974       Impact factor: 16.830

5.  Optimised parameters for A-DNA and B-DNA.

Authors:  S Arnott; D W Hukins
Journal:  Biochem Biophys Res Commun       Date:  1972-06-28       Impact factor: 3.575

6.  Complementary oligonucleotide binding to the anticodon loop of fMet-transfer RNA.

Authors:  O C Uhlenbeck; J Baller; P Doty
Journal:  Nature       Date:  1970-02-07       Impact factor: 49.962

7.  Molecular mechanics of translation: a reciprocating ratchet mechanism.

Authors:  C Woese
Journal:  Nature       Date:  1970-05-30       Impact factor: 49.962

8.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

9.  Low activity of -galactosidase in frameshift mutants of Escherichia coli.

Authors:  J F Atkins; D Elseviers; L Gorini
Journal:  Proc Natl Acad Sci U S A       Date:  1972-05       Impact factor: 11.205

10.  The nucleotide sequence of the first externally suppressible--1 frameshift mutant, and of some nearby leaky frameshift mutants.

Authors:  J F Atkins; B P Nichols; S Thompson
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  13 in total

1.  Characterization of mouse mammary tumor virus gag-pro gene products and the ribosomal frameshift site by protein sequencing.

Authors:  A Hizi; L E Henderson; T D Copeland; R C Sowder; C V Hixson; S Oroszlan
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

Review 2.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

3.  tRNA anticodon replacement experiments show that ribosomal frameshifting can be caused by doublet decoding.

Authors:  A G Bruce; J F Atkins; R F Gesteland
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

4.  Base substitutions in the tRNA anticodon arm do not degrade the accuracy of reading frame maintenance.

Authors:  J F Curran; M Yarus
Journal:  Proc Natl Acad Sci U S A       Date:  1986-09       Impact factor: 11.205

5.  Nucleotide sequence of a yeast Ty element: evidence for an unusual mechanism of gene expression.

Authors:  J Clare; P Farabaugh
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

6.  Complete nucleotide sequence of a milk-transmitted mouse mammary tumor virus: two frameshift suppression events are required for translation of gag and pol.

Authors:  R Moore; M Dixon; R Smith; G Peters; C Dickson
Journal:  J Virol       Date:  1987-02       Impact factor: 5.103

Review 7.  Errors and alternatives in reading the universal genetic code.

Authors:  J Parker
Journal:  Microbiol Rev       Date:  1989-09

8.  A mitochondrial frameshift-suppressor (+1) [corrected] of the yeast S. cerevisiae maps in the mitochondrial 15S rRNA locus.

Authors:  B Weiss-Brummer; H Sakai; F Kaudewitz
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

9.  Expression of a cloned Bacillus thuringiensis crystal protein gene in Escherichia coli.

Authors:  H E Schnepf; H C Wong; H R Whiteley
Journal:  J Bacteriol       Date:  1987-09       Impact factor: 3.490

Review 10.  Principles of molecular organization, expression, and evolution of closteroviruses: over the barriers.

Authors:  A A Agranovsky
Journal:  Adv Virus Res       Date:  1996       Impact factor: 9.937

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