Literature DB >> 6592583

Theory of Mössbauer spectra of proteins fluctuating between conformational substates.

W Nadler, K Schulten.   

Abstract

Mössbauer spectra of 57Fe in proteins fluctuating between different conformational substates are evaluated by means of a two-sided Padée approximation, which can reproduce the low and high frequency dependence of the spectral line shape I(omega) to any desired accuracy. The dynamics of the atom is modeled as Brownian motion in a multiminimum potential and described by a Fokker-Planck equation. The Mössbauer spectrum is expanded in terms of Lorentzian contributions, which can be attributed separately to fluctuations between conformational substates (potential minima) and to relaxation within the substates. In the limit of closely spaced substates, the Mössbauer spectra can be accounted for by an effective diffusion coefficient with Arrhenius-type temperature dependence. We demonstrate that the observed temperature dependence of Mössbauer spectra of proteins [Parak, F., Knapp, E.W. & Kucheida, D. (1982) J. Mol. Biol. 161, 177-194] can be accounted for by stochastic motion in a multiminimum potential.

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Year:  1984        PMID: 6592583      PMCID: PMC391782          DOI: 10.1073/pnas.81.18.5719

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  8 in total

1.  Dynamics of folded proteins.

Authors:  J A McCammon; B R Gelin; M Karplus
Journal:  Nature       Date:  1977-06-16       Impact factor: 49.962

2.  Temperature-dependent X-ray diffraction as a probe of protein structural dynamics.

Authors:  H Frauenfelder; G A Petsko; D Tsernoglou
Journal:  Nature       Date:  1979-08-16       Impact factor: 49.962

3.  Conformational substates in a protein: structure and dynamics of metmyoglobin at 80 K.

Authors:  H Hartmann; F Parak; W Steigemann; G A Petsko; D R Ponzi; H Frauenfelder
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

4.  Evidence for a correlation between the photoinduced electron transfer and dynamic properties of the chromatophore membranes from Rhodospirillum rubrum.

Authors:  F Parak; E N Frolov; A A Kononenko; R L Mössbauer; V I Goldanskii; A B Rubin
Journal:  FEBS Lett       Date:  1980-08-11       Impact factor: 4.124

5.  Dynamics of metmyoglobin crystals investigated by nuclear gamma resonance absorption.

Authors:  F Parak; E N Frolov; R L Mössbauer; V I Goldanskii
Journal:  J Mol Biol       Date:  1981-02-05       Impact factor: 5.469

6.  Protein dynamics. Mössbauer spectroscopy on deoxymyoglobin crystals.

Authors:  F Parak; E W Knapp; D Kucheida
Journal:  J Mol Biol       Date:  1982-10-15       Impact factor: 5.469

7.  Dynamics of heme iron in crystals of metmyoglobin and deoxymyoglobin.

Authors:  E R Bauminger; S G Cohen; I Nowik; S Ofer; J Yariv
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205

8.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

  8 in total
  5 in total

1.  Molecular dynamics study of unbinding of the avidin-biotin complex.

Authors:  S Izrailev; S Stepaniants; M Balsera; Y Oono; K Schulten
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

2.  Molecular and stochastic dynamics of proteins.

Authors:  W Nadler; A T Brünger; K Schulten; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

3.  Solid state 2H NMR analysis of furanose ring dynamics in DNA containing uracil.

Authors:  Monica N Kinde-Carson; Crystal Ferguson; Nathan A Oyler; Gerard S Harbison; Gary A Meints
Journal:  J Phys Chem B       Date:  2010-03-11       Impact factor: 2.991

4.  Thermal properties of water in myoglobin crystals and solutions at subzero temperatures.

Authors:  W Doster; A Bachleitner; R Dunau; M Hiebl; E Lüscher
Journal:  Biophys J       Date:  1986-08       Impact factor: 4.033

5.  Heme-solvent coupling: a Mössbauer study of myoglobin in sucrose.

Authors:  H Lichtenegger; W Doster; T Kleinert; A Birk; B Sepiol; G Vogl
Journal:  Biophys J       Date:  1999-01       Impact factor: 4.033

  5 in total

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