Literature DB >> 6572002

Detection of sickle cell beta S-globin allele by hybridization with synthetic oligonucleotides.

B J Conner, A A Reyes, C Morin, K Itakura, R L Teplitz, R B Wallace.   

Abstract

Two 19-base-long oligonucleotides were synthesized, one complementary to the normal human beta-globin gene (beta A) and one complementary to the sickle cell beta-globin gene (beta S). The nonadecanucleotides were radioactively labeled and used as probes in DNA hybridization. Under appropriate hybridization conditions, these probes can be used to distinguish the beta A gene from the beta S allele. The DNA from individuals homozygous for the normal beta-globin gene (beta A beta A) only hybridized with the beta A specific probe; the DNA from those homozygous for the sickle cell beta-globin gene (beta S beta S) only hybridized with the beta S specific probe. The DNA from heterozygous individuals (beta A beta S) hybridized with both probes. This allele-specific hybridization behavior of oligonucleotides provides a general method for diagnosis of any genetic disease which involves a point mutation in the DNA sequence of a single-copy gene.

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Year:  1983        PMID: 6572002      PMCID: PMC393356          DOI: 10.1073/pnas.80.1.278

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Use of synthetic oligonucleotides as hybridization probes: isolation of cloned cDNA sequences for human beta 2-microglobulin.

Authors:  S V Suggs; R B Wallace; T Hirose; E H Kawashima; K Itakura
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

2.  DNA analysis in the diagnosis of hemoglobin disorders.

Authors:  M Goossens; Y Y Kan
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

3.  The primary structure of the human epsilon-globin gene.

Authors:  F E Baralle; C C Shoulders; N J Proudfoot
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

4.  The nucleotide sequence of the human beta-globin gene.

Authors:  R M Lawn; A Efstratiadis; C O'Connell; T Maniatis
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

5.  Linkage of beta-thalassaemia mutations and beta-globin gene polymorphisms with DNA polymorphisms in human beta-globin gene cluster.

Authors:  S H Orkin; H H Kazazian; S E Antonarakis; S C Goff; C D Boehm; J P Sexton; P G Waber; P J Giardina
Journal:  Nature       Date:  1982-04-15       Impact factor: 49.962

Review 6.  The molecular genetics of human hemoglobins.

Authors:  T Maniatis; E F Fritsch; J Lauer; R M Lawn
Journal:  Annu Rev Genet       Date:  1980       Impact factor: 16.830

7.  Cloning and sequence of cDNA coding for alpha 1-antitrypsin.

Authors:  K Kurachi; T Chandra; S J Degen; T T White; T L Marchioro; S L Woo; E W Davie
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

8.  Oligonucleotide directed mutagenesis of the human beta-globin gene: a general method for producing specific point mutations in cloned DNA.

Authors:  R B Wallace; M Schold; M J Johnson; P Dembek; K Itakura
Journal:  Nucleic Acids Res       Date:  1981-08-11       Impact factor: 16.971

9.  Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.

Authors:  J L Slightom; A E Blechl; O Smithies
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

10.  The use of synthetic oligonucleotides as hybridization probes. II. Hybridization of oligonucleotides of mixed sequence to rabbit beta-globin DNA.

Authors:  R B Wallace; M J Johnson; T Hirose; T Miyake; E H Kawashima; K Itakura
Journal:  Nucleic Acids Res       Date:  1981-02-25       Impact factor: 16.971

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  126 in total

1.  Mutation detection by stacking hybridization on genosensor arrays.

Authors:  R Maldonado-Rodriguez; M Espinosa-Lara; P Loyola-Abitia; W G Beattie; K L Beattie
Journal:  Mol Biotechnol       Date:  1999-02       Impact factor: 2.695

2.  Use of immobilized PCR primers to generate covalently immobilized DNAs for in vitro transcription/translation reactions.

Authors:  J D Andreadis; L A Chrisey
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

3.  A system for specific, high-throughput genotyping by allele-specific primer extension on microarrays.

Authors:  T Pastinen; M Raitio; K Lindroos; P Tainola; L Peltonen; A C Syvänen
Journal:  Genome Res       Date:  2000-07       Impact factor: 9.043

4.  MagiProbe: a novel fluorescence quenching-based oligonucleotide probe carrying a fluorophore and an intercalator.

Authors:  Akio Yamane
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

5.  New separation-free assay technique for SNPs using two-photon excitation fluorometry.

Authors:  Jonne Vaarno; Emmi Ylikoski; Niko J Meltola; Juhani T Soini; Pekka Hänninen; Riitta Lahesmaa; Aleksi E Soini
Journal:  Nucleic Acids Res       Date:  2004-07-19       Impact factor: 16.971

6.  Automated DNA diagnostics using an ELISA-based oligonucleotide ligation assay.

Authors:  D A Nickerson; R Kaiser; S Lappin; J Stewart; L Hood; U Landegren
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

7.  Rapid typing of HLA-DQB1 DNA polymorphism using nonradioactive oligonucleotide probes and amplified DNA.

Authors:  T L Bugawan; H A Erlich
Journal:  Immunogenetics       Date:  1991       Impact factor: 2.846

8.  Anti-Müllerian hormone Bruxelles: a nonsense mutation associated with the persistent Müllerian duct syndrome.

Authors:  B Knebelmann; L Boussin; D Guerrier; L Legeai; A Kahn; N Josso; J Y Picard
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

9.  Mutation analysis of beta-thalassemia genes in a German family reveals a rare transversion in the first intron.

Authors:  A Eigel; J Schnee; R Oehme; J Horst
Journal:  Hum Genet       Date:  1989-03       Impact factor: 4.132

10.  Human genomic library screened with 17-base oligonucleotide probes yields a novel interferon gene.

Authors:  R M Torczynski; M Fuke; A P Bollon
Journal:  Proc Natl Acad Sci U S A       Date:  1984-10       Impact factor: 11.205

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