Literature DB >> 2247466

Automated DNA diagnostics using an ELISA-based oligonucleotide ligation assay.

D A Nickerson1, R Kaiser, S Lappin, J Stewart, L Hood, U Landegren.   

Abstract

DNA diagnostics, the detection of specific DNA sequences, will play an increasingly important role in medicine as the molecular basis of human disease is defined. Here, we demonstrate an automated, nonisotopic strategy for DNA diagnostics using amplification of target DNA segments by the polymerase chain reaction (PCR) and the discrimination of allelic sequence variants by a colorimetric oligonucleotide ligation assay (OLA). We have applied the automated PCR/OLA procedure to diagnosis of common genetic diseases, such as sickle cell anemia and cystic fibrosis (delta F508 mutation), and to genetic linkage mapping of gene segments in the human T-cell receptor beta-chain locus. The automated PCR/OLA strategy provides a rapid system for diagnosis of genetic, malignant, and infectious diseases as well as a powerful approach to genetic linkage mapping of chromosomes and forensic DNA typing.

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Year:  1990        PMID: 2247466      PMCID: PMC55072          DOI: 10.1073/pnas.87.22.8923

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  A common language for physical mapping of the human genome.

Authors:  M Olson; L Hood; C Cantor; D Botstein
Journal:  Science       Date:  1989-09-29       Impact factor: 47.728

2.  Conserved organization of the human and murine T-cell receptor beta-gene families.

Authors:  E Lai; P Concannon; L Hood
Journal:  Nature       Date:  1988-02-11       Impact factor: 49.962

3.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

4.  Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction.

Authors:  K B Mullis; F A Faloona
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

5.  Detection and localization of single base changes by denaturing gradient gel electrophoresis.

Authors:  R M Myers; T Maniatis; L S Lerman
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

6.  A genetic linkage map of the human genome.

Authors:  H Donis-Keller; P Green; C Helms; S Cartinhour; B Weiffenbach; K Stephens; T P Keith; D W Bowden; D R Smith; E S Lander
Journal:  Cell       Date:  1987-10-23       Impact factor: 41.582

7.  Scanning detection of mutations in human ornithine transcarbamoylase by chemical mismatch cleavage.

Authors:  M Grompe; D M Muzny; C T Caskey
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

8.  Identification of the cystic fibrosis gene: cloning and characterization of complementary DNA.

Authors:  J R Riordan; J M Rommens; B Kerem; N Alon; R Rozmahel; Z Grzelczak; J Zielenski; S Lok; N Plavsic; J L Chou
Journal:  Science       Date:  1989-09-08       Impact factor: 47.728

9.  Specificity of the nick-closing activity of bacteriophage T4 DNA ligase.

Authors:  D Y Wu; R B Wallace
Journal:  Gene       Date:  1989       Impact factor: 3.688

10.  The ligation amplification reaction (LAR)--amplification of specific DNA sequences using sequential rounds of template-dependent ligation.

Authors:  D Y Wu; R B Wallace
Journal:  Genomics       Date:  1989-05       Impact factor: 5.736

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  53 in total

1.  Sequence-tagged connectors: a sequence approach to mapping and scanning the human genome.

Authors:  G G Mahairas; J C Wallace; K Smith; S Swartzell; T Holzman; A Keller; R Shaker; J Furlong; J Young; S Zhao; M D Adams; L Hood
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

Review 2.  Automated mutation analysis.

Authors:  D Ravine
Journal:  J Inherit Metab Dis       Date:  1999-06       Impact factor: 4.982

3.  Linkage disequilibrium and allele-frequency distributions for 114 single-nucleotide polymorphisms in five populations.

Authors:  K A Goddard; P J Hopkins; J M Hall; J S Witte
Journal:  Am J Hum Genet       Date:  2000-01       Impact factor: 11.025

4.  Fluorescence polarization in homogeneous nucleic acid analysis.

Authors:  X Chen; L Levine; P Y Kwok
Journal:  Genome Res       Date:  1999-05       Impact factor: 9.043

Review 5.  Advances in nucleic acid-based detection methods.

Authors:  M J Wolcott
Journal:  Clin Microbiol Rev       Date:  1992-10       Impact factor: 26.132

6.  Exo-proofreading, a versatile SNP scoring technology.

Authors:  Patrick Cahill; Michele Bakis; James Hurley; Veena Kamath; William Nielsen; Dina Weymouth; Josee Dupuis; Lynn Doucette-Stamm; Douglas R Smith
Journal:  Genome Res       Date:  2003-04-14       Impact factor: 9.043

7.  Straightforward detection of SNPs in double-stranded DNA by using exonuclease III/nuclease S1/PNA system.

Authors:  Binzhi Ren; Jing-Min Zhou; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2004-02-24       Impact factor: 16.971

8.  Custom-designed MLPA using multiple short synthetic probes: application to methylation analysis of five promoter CpG islands in tumor and urine specimens from patients with bladder cancer.

Authors:  Reza R Serizawa; Ulrik Ralfkiaer; Christina Dahl; Gitte W Lam; Alastair B Hansen; Kenneth Steven; Thomas Horn; Per Guldberg
Journal:  J Mol Diagn       Date:  2010-04-22       Impact factor: 5.568

9.  Detection of low-level KRAS mutations using PNA-mediated asymmetric PCR clamping and melting curve analysis with unlabeled probes.

Authors:  Ji Eun Oh; Hee Sun Lim; Chang Hyeok An; Eun Goo Jeong; Ji Youn Han; Sug Hyung Lee; Nam Jin Yoo
Journal:  J Mol Diagn       Date:  2010-04-22       Impact factor: 5.568

10.  Genotyping and haplotyping of polymorphisms directly from genomic DNA via coupled amplification and sequencing (CAS).

Authors:  G Ruano; K K Kidd
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

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